Protein Alignment SkpB and skr-1

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_492513.1
• Gene: skr-1 / 172775
• WormBaseID: WBGene00004807
• Length: 176
• Species: Caenorhabditis elegans
• Alignment Length: 161
• Identity: 100/161 - (62%)
• Similarity: 123/161 - (76%)
• Gaps: 4/161 - (2%)

  Fly     4 IRLESADKEIFDTDQEIAKCSETIRIAIEDLG--DESDNSVLPLP--NVNSLILKKVLHWATYHK 64
            |::.|:|.|||...:.:.:.|.||...:.|||  ||...:..|:|  ||.:.|||||:.|..:|.
 Worm    16 IKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEPIPVQNVTASILKKVISWCNHHH 80

  Fly    65 DDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGKS 129
            .||:.||:.:|:|||||||.|||.:|||||||||||||||||||:|:||||||||||||||||||
 Worm    81 SDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKS 145

  Fly   130 PQAIRDTFAIQNDFLPQEEEQVRKENEWCED 160
            |:.||.||.|:|||.|:||||:||||.||||
 Worm   146 PEEIRRTFNIKNDFTPEEEEQIRKENAWCED 176

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	72/124 (58%)
		Skp1	111..158	CDD:460222	36/46 (78%)
skr-1	NP_492513.1	BTB_POZ_SKP1	16..141	CDD:349631	72/124 (58%)
		Skp1	127..174	CDD:460222	36/46 (78%)