Protein Alignment SkpB and skr-2

DIOPT Version :10

• Sequence 1: NP_610729.1
• Gene: SkpB / 36298
• FlyBaseID: FBgn0026176
• Length: 161
• Species: Drosophila melanogaster
• Sequence 2: NP_492512.1
• Gene: skr-2 / 172773
• WormBaseID: WBGene00004808
• Length: 174
• Species: Caenorhabditis elegans
• Alignment Length: 162
• Identity: 86/162 - (53%)
• Similarity: 114/162 - (70%)
• Gaps: 8/162 - (4%)

  Fly     4 IRLESADKEIFDTDQEIAKCSETIRIAIEDLG---DESDNS-VLPLPNVNSLILKKVLHWATYHK 64
            |::.|:|.|||...:.:.:.|.|:...:.|||   ||..|: .:|:.||.:.|||||::|.|.|:
 Worm    16 IKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIPVQNVTASILKKVINWCTKHQ 80

  Fly    65 DDPVVTEEVENKEKRTD-DISSWDADFLKVDQGTLFELILAANYLNIQGLLDVTCKTVANMIKGK 128
            .||:.||:   .||:|| .|..||..||.:|||||||||||||||:|:|||||.|::||||||||
 Worm    81 SDPIPTED---SEKKTDGSIQDWDKKFLDIDQGTLFELILAANYLDIKGLLDVACQSVANMIKGK 142

  Fly   129 SPQAIRDTFAIQNDFLPQEEEQVRKENEWCED 160
            ||..||..|.|::||..:|.||:||||.||:|
 Worm   143 SPDEIRRAFNIKDDFTAEEREQIRKENAWCDD 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SkpB	NP_610729.1	BTB_POZ_SKP1	3..125	CDD:349631	63/125 (50%)
		Skp1	111..158	CDD:460222	29/46 (63%)
skr-2	NP_492512.1	BTB_POZ_SKP1	16..139	CDD:349631	63/125 (50%)
		Skp1	125..172	CDD:460222	29/46 (63%)