DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8888 and Hsd17b2

DIOPT Version :9

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_077367.2 Gene:Hsd17b2 / 79243 RGDID:621803 Length:381 Species:Rattus norvegicus


Alignment Length:360 Identity:104/360 - (28%)
Similarity:172/360 - (47%) Gaps:68/360 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 AAIVTSHLLHALDISSISTFAVFVWFALATVGAVLFYHFVKVSASG--------KGVLITGCEAP 106
            |.:::..||.:|.:.|:|.|             .|.|    ||:|.        |.||:||.::.
  Rat    47 ACLLSLSLLCSLFLLSVSCF-------------FLLY----VSSSDQDLLPVDQKAVLVTGADSG 94

  Fly   107 LAWYLAKKLDDLGFTVYAGFNTPIEESDEAKILKEVTSGRMKLLHLDVTSEKTILEAARYVSQHL 171
            ....|||.||.|||||:||...  :|...|:.|::..|.|:.:|.:|||..:.|.:....|::.:
  Rat    95 FGHALAKHLDKLGFTVFAGVLD--KEGPGAEELRKNCSERLSVLQMDVTKPEQIKDVHSEVAEKI 157

  Fly   172 PHGAEGLWSVVHCA---HWIALGELEWIPFAVLRKSLDLNLLGSARLTQIFLPLVRRAHGRVVFL 233
            ..  :|||:||:.|   |:...|||  ||..|.||.:.:|..|:..:|::||||:|::.||:|.:
  Rat   158 QD--KGLWAVVNNAGVLHFPIDGEL--IPMTVYRKCMAVNFFGAVEVTKVFLPLLRKSKGRLVNV 218

  Fly   234 TSGLNRVPSPVRGIQCATQAAVDCFAACLRQEMRTRGVDVSVVAAGEFAPG-----NGWLNETEL 293
            :|....:|..:.....:|:||:..|:|.:|||:...||.|..:..|.|...     :.| ::.| 
  Rat   219 SSMGAMIPFQMMAAYASTKAAISMFSAVIRQELAKWGVKVVTIHPGGFQTNIVGSQDSW-DKME- 281

  Fly   294 RDQAKQMWNQLSSEQKKTYGEDY---YEAAMTSVEKYSRQAADIQPTLRVLIDAVTRT------- 348
                |::.:..|.|.::.||::|   .:.|:..:.:.|.  .||.|.||.:..|:...       
  Rat   282 ----KEILDHFSKEIQENYGQEYVHTQKLALPVMREMSN--PDITPVLRDIQHAICAKNHSSFYC 340

  Fly   349 --------FPMARYTPVTSSERLQIFLAEHLAPSL 375
                    ...|.|:|::   .|...|..:..|.|
  Rat   341 SGRMTYLWICFAAYSPIS---LLDYILKNYFTPKL 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 NADB_Rossmann 96..380 CDD:304358 92/306 (30%)
adh_short 96..293 CDD:278532 70/204 (34%)
Hsd17b2NP_077367.2 type2_17beta_HSD-like_SDR_c 84..364 CDD:187665 89/296 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 120 1.000 Domainoid score I5601
eggNOG 1 0.900 - - E1_KOG1610
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D370032at33208
OrthoFinder 1 1.000 - - FOG0000161
OrthoInspector 1 1.000 - - otm45679
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X110
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.820

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