DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8888 and hsd17b6

DIOPT Version :9

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001011296.1 Gene:hsd17b6 / 496749 XenbaseID:XB-GENE-5821225 Length:318 Species:Xenopus tropicalis


Alignment Length:300 Identity:94/300 - (31%)
Similarity:152/300 - (50%) Gaps:35/300 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 VWF-ALATVGAVLFYHFVK-----VSASGKGVLITGCEAPLAWYLAKKLDDLGFTVYAGFNTPIE 131
            :|. .|..:..:|.|.:.:     .:.|.|.|.||||::.....|||:||..|..|.|   |.:.
 Frog     1 MWLPLLVIITLMLLYRWSRQRKKIQNLSDKYVFITGCDSGFGNVLAKQLDKQGIQVLA---TCLT 62

  Fly   132 ESDEAKILKEVTSGRMKLLHLDVTSEKTILEAARYVSQHLPHGAEGLWSVVHCA-HWIALGELEW 195
            |.. |:.||..||.|::.::::||..:::..||.:|:..:  |..|||.:|:.| :........|
 Frog    63 EKG-AETLKSETSSRLRTVNMNVTDSQSVKSAAEWVTGIV--GDAGLWGLVNNAGYGFVFSPTGW 124

  Fly   196 IPFAVLRKSLDLNLLGSARLTQIFLPLVRRAHGRVVFLTSGLNRVPSPVRGIQCATQAAVDCFAA 260
            .......|.|::||||...:|...|||:|:|.||:|.::|...|: :.:.|..|.::..|:.|:.
 Frog   125 QTKEHFVKVLEINLLGMVDVTLNLLPLLRKAQGRIVNVSSNAGRL-AFIGGGYCLSKFGVEAFSD 188

  Fly   261 CLRQEMRTRGVDVSVVAAGEFAPGNGWLNETELRDQAKQMWNQLSSEQKKTYGEDYYE------A 319
            .||:|:...|:.||::..|.|..|.| ::...|: ..:|:||.|..|.||:|||.||:      |
 Frog   189 SLRRELLDFGIKVSIIEPGAFRTGMG-VSGPHLQ-FLEQLWNNLDPETKKSYGEKYYQQYFQNVA 251

  Fly   320 AMTSVEKYSRQAADIQPTLRVLID----AVTRTFPMARYT 355
            .:||:         ..|.|..:.|    |:|...|..||:
 Frog   252 CLTSM---------TSPKLHKVTDCMEHALTAVHPWTRYS 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 NADB_Rossmann 96..380 CDD:304358 89/270 (33%)
adh_short 96..293 CDD:278532 65/197 (33%)
hsd17b6NP_001011296.1 NADB_Rossmann 30..306 CDD:389744 89/270 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D370032at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43313
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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