DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8888 and Rdh7

DIOPT Version :9

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_598227.3 Gene:Rdh7 / 360420 RGDID:631370 Length:317 Species:Rattus norvegicus


Alignment Length:291 Identity:95/291 - (32%)
Similarity:149/291 - (51%) Gaps:17/291 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 VW-FALATVG----AVLFYHFVKVS-ASGKGVLITGCEAPLAWYLAKKLDDLGFTVYAGFNTPIE 131
            :| :.||.||    ..||.....|| ...|.|.||||::.....||::||..|..|.|...|   
  Rat     1 MWLYLLALVGLWNLLRLFRERKVVSHLQDKYVFITGCDSGFGNLLARQLDRRGMRVLAACLT--- 62

  Fly   132 ESDEAKILKEVTSGRMKLLHLDVTSEKTILEAARYVSQHLPHGAEGLWSVVHCAH-WIALGELEW 195
             ...|:.|:..||.|::.:.||||..::|:.|.::|.:.:  |..|||.:|:.|. .:.:|..||
  Rat    63 -EKGAEQLRSKTSDRLETVILDVTKTESIVAATQWVKERV--GNRGLWGLVNNAGISVPMGPNEW 124

  Fly   196 IPFAVLRKSLDLNLLGSARLTQIFLPLVRRAHGRVVFLTSGLNRVPSPVRGIQCATQAAVDCFAA 260
            :........||:||||...:|...|||||:|.||||.:.|.:.|: |.:.|..|.::..|:.|:.
  Rat   125 MRKKDFASVLDVNLLGVIEVTLNMLPLVRKARGRVVNIASTMGRM-SLLGGGYCISKYGVEAFSD 188

  Fly   261 CLRQEMRTRGVDVSVVAAGEFAPGNGWLNETELRDQAKQMWNQLSSEQKKTYGEDYYEAAMTSVE 325
            .||:|:...||.|:::..|.|.  ....|...|.|..|::|:|.:.|.|:.|||.:.::.|.::|
  Rat   189 SLRRELTYFGVKVAIIEPGGFK--TNVTNMERLSDNLKKLWDQATEEVKEIYGEKFRDSYMKAME 251

  Fly   326 KYSRQ-AADIQPTLRVLIDAVTRTFPMARYT 355
            ..... :.|:......:..|:|...|..||:
  Rat   252 SLVNMCSGDLSLVTDCMEHALTSCHPRTRYS 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 NADB_Rossmann 96..380 CDD:304358 86/262 (33%)
adh_short 96..293 CDD:278532 68/197 (35%)
Rdh7NP_598227.3 type2_17beta_HSD-like_SDR_c 30..306 CDD:187665 86/262 (33%)
adh_short 30..214 CDD:278532 67/192 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 120 1.000 Domainoid score I5601
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 164 1.000 Inparanoid score I4098
OMA 1 1.010 - - QHG48608
OrthoDB 1 1.010 - - D370032at33208
OrthoFinder 1 1.000 - - FOG0000161
OrthoInspector 1 1.000 - - otm45679
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43313
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X110
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

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