DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8888 and firl

DIOPT Version :9

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001033900.2 Gene:firl / 34627 FlyBaseID:FBgn0032405 Length:318 Species:Drosophila melanogaster


Alignment Length:253 Identity:59/253 - (23%)
Similarity:96/253 - (37%) Gaps:66/253 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 IVTSHLLHALDISS---------ISTFAVFVWFALATVGAVLFYHFVKV-------SASGKGVLI 100
            ::...::|....|.         :..|.::|...|.     ||...|::       ..||:.|||
  Fly     1 MIEREIIHTTPASKRIFDVLKDVLQFFELYVRILLE-----LFVSLVQIVLPKKQKDVSGEIVLI 60

  Fly   101 TGCEAPLAWYLAKKLDDLGFTVYA----GFNTPIEESDEAKILKEVTSGRMKLLHLDVT--SEKT 159
            ||....:...||.....||.||..    |.|. ::..::|   |.:..|.:.....||:  .|.|
  Fly    61 TGTGHGIGRELALHYASLGSTVVCVDIDGKNN-LQTVEKA---KRLNLGEVYSYSCDVSKRDEVT 121

  Fly   160 ILEAARYVSQHLPHGAEGLWSVVHCAHWIALGELEWIP-FAVLRKS-------LDLNLLGSARLT 216
            .|             |:.:.|.|.|.. :.:..:..:| ..:|::|       .|:|:.......
  Fly   122 AL-------------ADRIKSDVGCIS-VLVNNVGIMPTHPILQQSAEEIQRVFDVNVFSQFWTI 172

  Fly   217 QIFLP-LVRRAHGRVVFLTS--GL----NRVPSPVRGIQCATQAAVDCFAACLRQEMR 267
            |.||| :..:..|.::.::|  ||    |.||      .|||:.||......|..|:|
  Fly   173 QAFLPHMQEKCRGHIICMSSIAGLVGISNLVP------YCATKFAVRGLMEALHAELR 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 NADB_Rossmann 96..380 CDD:304358 49/193 (25%)
adh_short 96..293 CDD:278532 49/193 (25%)
firlNP_001033900.2 adh_short 56..246 CDD:278532 49/193 (25%)
17beta-HSDXI-like_SDR_c 57..299 CDD:187598 49/192 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447593
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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