DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8888 and Hsd17b6

DIOPT Version :10

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_063119152.1 Gene:Hsd17b6 / 286964 RGDID:708343 Length:375 Species:Rattus norvegicus


Alignment Length:324 Identity:94/324 - (29%)
Similarity:160/324 - (49%) Gaps:30/324 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AVFVWFALATVGAVLFYHFVK-------VS-ASGKGVLITGCEAPLAWYLAKKLDDLGFTVYAGF 126
            ::.:||.|.|:  |..|:.::       || ...|.|.||||::.....||::||..|..|.|..
  Rat    56 SLIMWFYLVTL--VGLYYLLRWYRERQVVSHLHDKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 118

  Fly   127 NTPIEESDEAKILKEVTSGRMKLLHLDVTSEKTILEAARYVSQHLPHGAEGLWSVVHCAH-WIAL 190
            .|    ...|:.||..||.|::.:.||||:..:|..|.::|.:|:  |.:|||.:|:.|. :.|.
  Rat   119 LT----EKGAEELKSKTSDRLETVILDVTNTDSISAATQWVKEHV--GDKGLWGLVNNAGVFQAF 177

  Fly   191 GELEWIPFAVLRKSLDLNLLGSARLTQIFLPLVRRAHGRVVFLTSGLNRVPSPVRGIQCATQAAV 255
            ..:||...........:||:|.|::|...|.||::|.||:|.::|.|.|| :...|....::..|
  Rat   178 AYIEWCRPEDCMSIFQVNLIGLAQVTLSMLFLVKKARGRIVNVSSVLGRV-ALFGGFYSCSKYGV 241

  Fly   256 DCFAACLRQEMRTRGVDVSVVAAGEFAPGNGWLNETEL-RDQAKQMWNQLSSEQKKTYGEDYYEA 319
            :.|:..||:|:|..||.||::..|.|...   :.:.|| .::.|:.|.......:::||:.:::.
  Rat   242 EAFSDVLRREIRDFGVKVSIIEPGSFKTR---MTDAELIIEKTKKTWEATPEHIRESYGQQFFDD 303

  Fly   320 AMTSVEKYSRQAADIQPTLRVLID----AVTRTFPMARYTPVTSSERLQIFLAEHLAPSLYESL 379
            ...:..   |:.......|.::.|    |:|..:|..||:....: ||......:|..||.:.|
  Rat   304 FCNTTR---RELKKCSTNLSLVTDCMEHALTSKYPRTRYSAGWDA-RLFFIPLSYLPTSLVDCL 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 Rossmann-fold NAD(P)(+)-binding proteins 96..380 CDD:473865 86/290 (30%)
Hsd17b6XP_063119152.1 None

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