DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8888 and Hsd17b6

DIOPT Version :9

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_775427.2 Gene:Hsd17b6 / 286964 RGDID:708343 Length:327 Species:Rattus norvegicus


Alignment Length:324 Identity:94/324 - (29%)
Similarity:160/324 - (49%) Gaps:30/324 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AVFVWFALATVGAVLFYHFVK-------VS-ASGKGVLITGCEAPLAWYLAKKLDDLGFTVYAGF 126
            ::.:||.|.|:  |..|:.::       || ...|.|.||||::.....||::||..|..|.|..
  Rat     8 SLIMWFYLVTL--VGLYYLLRWYRERQVVSHLHDKYVFITGCDSGFGNLLARQLDRRGMRVLAAC 70

  Fly   127 NTPIEESDEAKILKEVTSGRMKLLHLDVTSEKTILEAARYVSQHLPHGAEGLWSVVHCAH-WIAL 190
            .|    ...|:.||..||.|::.:.||||:..:|..|.::|.:|:  |.:|||.:|:.|. :.|.
  Rat    71 LT----EKGAEELKSKTSDRLETVILDVTNTDSISAATQWVKEHV--GDKGLWGLVNNAGVFQAF 129

  Fly   191 GELEWIPFAVLRKSLDLNLLGSARLTQIFLPLVRRAHGRVVFLTSGLNRVPSPVRGIQCATQAAV 255
            ..:||...........:||:|.|::|...|.||::|.||:|.::|.|.|| :...|....::..|
  Rat   130 AYIEWCRPEDCMSIFQVNLIGLAQVTLSMLFLVKKARGRIVNVSSVLGRV-ALFGGFYSCSKYGV 193

  Fly   256 DCFAACLRQEMRTRGVDVSVVAAGEFAPGNGWLNETEL-RDQAKQMWNQLSSEQKKTYGEDYYEA 319
            :.|:..||:|:|..||.||::..|.|...   :.:.|| .::.|:.|.......:::||:.:::.
  Rat   194 EAFSDVLRREIRDFGVKVSIIEPGSFKTR---MTDAELIIEKTKKTWEATPEHIRESYGQQFFDD 255

  Fly   320 AMTSVEKYSRQAADIQPTLRVLID----AVTRTFPMARYTPVTSSERLQIFLAEHLAPSLYESL 379
            ...:..   |:.......|.::.|    |:|..:|..||:....: ||......:|..||.:.|
  Rat   256 FCNTTR---RELKKCSTNLSLVTDCMEHALTSKYPRTRYSAGWDA-RLFFIPLSYLPTSLVDCL 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 NADB_Rossmann 96..380 CDD:304358 86/290 (30%)
adh_short 96..293 CDD:278532 66/197 (34%)
Hsd17b6NP_775427.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 120 1.000 Domainoid score I5601
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 164 1.000 Inparanoid score I4098
OMA 1 1.010 - - QHG48608
OrthoDB 1 1.010 - - D1390068at2759
OrthoFinder 1 1.000 - - FOG0000161
OrthoInspector 1 1.000 - - otm45679
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43313
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X110
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

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