DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8888 and Sdr9c7

DIOPT Version :9

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_006241577.1 Gene:Sdr9c7 / 259235 RGDID:628716 Length:313 Species:Rattus norvegicus


Alignment Length:321 Identity:90/321 - (28%)
Similarity:166/321 - (51%) Gaps:35/321 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 ISSISTFA-VFVWFALATVGAVLFYHFVKVSASGKGVLITGCEAPLAWYLAKKLDDLGFTVYAGF 126
            :::::.|| ::.||...        :.|| :.|.|.|.||||::.....||::|.|.|..|.|..
  Rat     1 MAALTDFAFMYRWFKNC--------NLVK-NLSEKYVFITGCDSGFGNLLARQLVDRGMKVLAAC 56

  Fly   127 NTPIEESDEAKILKEVTSGRMKLLHLDVTSEKTILEAARYVSQHLPHGAEGLWSVVHCAH-WIAL 190
            .|   |....|:|:: ||.::::..||||..:::..||::|...:  |.:|||::|:.|. .:..
  Rat    57 LT---EEGAQKLLQD-TSYQLQIFLLDVTKSESVKAAAQWVRDQV--GEQGLWALVNNAGVGLPS 115

  Fly   191 GELEWIPFAVLRKSLDLNLLGSARLTQIFLPLVRRAHGRVVFLTSGLNRVPSPVRGIQCATQAAV 255
            |..||:......|.:::||:|...:|...||::::|.||||.::|...|| :.:.|..|.::..|
  Rat   116 GPNEWLTKEDFVKVININLVGLIDVTLNMLPMLKKARGRVVNMSSSGGRV-AVIGGGYCVSKFGV 179

  Fly   256 DCFAACLRQEMRTRGVDVSVVAAGEFAPGNGWLNETELRDQAKQMWNQLSSEQKKTYGEDYYEAA 320
            :.|:..:|:|:...||.||::..|.:.  ...|.:..|:.:.:::|::|..|.:.:|||:|::. 
  Rat   180 EAFSDSIRRELHFFGVKVSIIEPGNYK--TSILGQEALQSRMRKLWDRLPQETRDSYGEEYFQT- 241

  Fly   321 MTSVEKYSRQAADIQPTLRVLIDAVTRTF--------PMARYTPVTSSERLQIFLAEHLAP 373
                  |:.:..::..|....|..||.:.        |..||.|....:.|.|.|::...|
  Rat   242 ------YTDKLVNLMRTAEPRISDVTNSMEHAIVSRSPRIRYNPGLDVKLLYIPLSKLPTP 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 NADB_Rossmann 96..380 CDD:304358 83/287 (29%)
adh_short 96..293 CDD:278532 62/197 (31%)
Sdr9c7XP_006241577.1 type2_17beta_HSD-like_SDR_c 26..302 CDD:187665 83/287 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 120 1.000 Domainoid score I5601
eggNOG 1 0.900 - - E1_KOG1610
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 164 1.000 Inparanoid score I4098
OMA 1 1.010 - - QHG48608
OrthoDB 1 1.010 - - D370032at33208
OrthoFinder 1 1.000 - - FOG0000161
OrthoInspector 1 1.000 - - otm45679
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43313
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X110
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.980

Return to query results.
Submit another query.