DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8888 and Rdh5

DIOPT Version :9

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_006513448.1 Gene:Rdh5 / 19682 MGIID:1201412 Length:320 Species:Mus musculus


Alignment Length:299 Identity:92/299 - (30%)
Similarity:146/299 - (48%) Gaps:29/299 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 VWFAL---ATVGAVLFYHFVKVS--ASGKGVLITGCEAPLAWYLAKKLDDLGFTVYAGFNTPIEE 132
            :|..|   |.:.|||:....:.|  ||...:.||||::.....||.:||..||.|.||..||...
Mouse     1 MWLPLLLGALLWAVLWLLRDRQSLPASDAFIFITGCDSGFGRLLALQLDQKGFQVLAGCLTPSGA 65

  Fly   133 SDEAKILKEVTSGRMKLLHLDVTSEKTILEAARYVSQHLPHGAEGLWSVVHCAHWIA--LGELEW 195
            .|    |:::.|.|:....||:|..:.:.:.|::|...:  |..||:.:|:.| .:|  :|...|
Mouse    66 ED----LQQMASSRLHTTLLDITDPQNVQQVAKWVKTRV--GETGLFGLVNNA-GVAGIIGPTPW 123

  Fly   196 IPFAVLRKSLDLNLLGSARLTQIFLPLVRRAHGRVVFLTSGLNRVPSPVRGIQCATQAAVDCFAA 260
            :.....::.|.:|.||...:|...|||:::|.||||.:||.|.|:.:...| .|.::..::.|:.
Mouse   124 LTQDDFQRVLSVNTLGPIGVTLALLPLLQQARGRVVNITSVLGRIAANGGG-YCVSKFGLEAFSD 187

  Fly   261 CLRQEMRTRGVDVSVVAAGEF-APGNGWLNETELRDQAKQMWNQLSSEQKKTYGEDYYEAAMTSV 324
            .||::|...||.||:|..|.| .|..   |...|....|..|.:|....:..|||.:.:   ||.
Mouse   188 SLRRDMAPFGVQVSIVEPGFFRTPVT---NLESLESTLKACWARLPPAIQAHYGEAFLD---TST 246

  Fly   325 E-KYSRQAADI--QPTL----RVLIDAVTRTFPMARYTP 356
            : :..|:..::  .|.|    ..|..|:|...|..||:|
Mouse   247 DLRVQRRIMNLICDPELTKVTSCLEHALTARHPRTRYSP 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 NADB_Rossmann 96..380 CDD:304358 83/271 (31%)
adh_short 96..293 CDD:278532 64/199 (32%)
Rdh5XP_006513448.1 NADB_Rossmann 30..308 CDD:419666 83/270 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 120 1.000 Domainoid score I5728
eggNOG 1 0.900 - - E1_KOG1610
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48608
OrthoDB 1 1.010 - - D370032at33208
OrthoFinder 1 1.000 - - FOG0000161
OrthoInspector 1 1.000 - - otm43606
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43313
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X110
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.930

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