DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8888 and F20G2.1

DIOPT Version :9

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_506406.1 Gene:F20G2.1 / 184742 WormBaseID:WBGene00008985 Length:249 Species:Caenorhabditis elegans


Alignment Length:140 Identity:31/140 - (22%)
Similarity:62/140 - (44%) Gaps:21/140 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 KGVLITGCEAPLAWYLAKK-LDDLGFTVYAGFNTPIEESDEAKILKEVTSGRMKLLHLDVTSEKT 159
            |.:||||....:...|.|: :.:....:..|   ...:...|..|..:...|:.:|.||:..:.:
 Worm     4 KSILITGANRGIGLGLLKQFIKNKDVQIIIG---TCRDPSNATELNSIKDTRVHILQLDIDCDDS 65

  Fly   160 ILEAARYVSQHLPHGAEGLWSVVHCAHWIALGELEWIPF--------AVLRKSLDLNLLGSARLT 216
            |.:....|.:.:  |.:||..:::.|.       .::|:        :.|.:.|:.|.:.:..:|
 Worm    66 IRKLGAEVEKLV--GEDGLTVLINNAG-------IFVPYDIDGEKSRSTLIRQLETNTISTVLIT 121

  Fly   217 QIFLPLVRRA 226
            |..|||::||
 Worm   122 QELLPLLKRA 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 NADB_Rossmann 96..380 CDD:304358 31/140 (22%)
adh_short 96..293 CDD:278532 31/140 (22%)
F20G2.1NP_506406.1 adh_short 4..208 CDD:278532 31/140 (22%)
carb_red_sniffer_like_SDR_c 6..248 CDD:187586 30/138 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1390068at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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