DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8888 and dhs-12

DIOPT Version :9

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_501850.1 Gene:dhs-12 / 177888 WormBaseID:WBGene00000975 Length:255 Species:Caenorhabditis elegans


Alignment Length:193 Identity:42/193 - (21%)
Similarity:71/193 - (36%) Gaps:71/193 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 KGVLITGCEAPLAWYLAKKLDDLGFTVYAGFNTPIEES--------DEAKILKEV--TSGRMKLL 150
            |.:.|||....:...|.::|          ...|..|:        |.||.|:.:  ...|:.|:
 Worm     4 KTIFITGANRGIGLGLVREL----------LKVPGVEALVAGARNIDGAKELQSLAKADARLHLI 58

  Fly   151 HLDVTSEKTILEAARYVSQHLPHGAEGL---------------------WSVVHCAHWIALGELE 194
            .:||:::.::..:.:.||..:  |..||                     .||:||          
 Worm    59 AVDVSNDGSLENSVKSVSGIV--GDRGLNLLINNAGLIESYGTTSAPNRASVLHC---------- 111

  Fly   195 WIPFAVLRKSLDLNLLGSARLTQIFLPLVRRAHGRVVFLTSGLNRVPSPVR----GIQCATQA 253
                      :|:|.:.:...:|.||||:::|...|    ||.:..|....    |..||:||
 Worm   112 ----------IDVNAVSALLASQHFLPLLQKAASHV----SGDSLTPDRAAIVNIGSDCASQA 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 NADB_Rossmann 96..380 CDD:304358 42/193 (22%)
adh_short 96..293 CDD:278532 42/193 (22%)
dhs-12NP_501850.1 adh_short 4..217 CDD:278532 42/193 (22%)
carb_red_sniffer_like_SDR_c 6..254 CDD:187586 41/191 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1390068at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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