DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8888 and Rdh9

DIOPT Version :10

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_694773.1 Gene:Rdh9 / 103142 MGIID:2143528 Length:317 Species:Mus musculus


Alignment Length:291 Identity:93/291 - (31%)
Similarity:148/291 - (50%) Gaps:17/291 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 VW-FALATVG---AVLFYHFVKVSA--SGKGVLITGCEAPLAWYLAKKLDDLGFTVYAGFNTPIE 131
            :| |.:|.||   .:.|:...:|.:  ..|.|.||||::.....||::||..|..|.|...|   
Mouse     1 MWLFLVALVGLWTLLCFFRERQVVSYLQDKYVFITGCDSGFGNLLARQLDRRGMRVLAACLT--- 62

  Fly   132 ESDEAKILKEVTSGRMKLLHLDVTSEKTILEAARYVSQHLPHGAEGLWSVVHCAH-WIALGELEW 195
             ...|:.|:..||.|::.:.||||..::|:.|.::|.:.:  |..|||.:|:.|. .|..|..||
Mouse    63 -EKGAEELRNKTSDRLETVILDVTKTESIVTATQWVKERV--GNRGLWGLVNNAGISIPSGPNEW 124

  Fly   196 IPFAVLRKSLDLNLLGSARLTQIFLPLVRRAHGRVVFLTSGLNRVPSPVRGIQCATQAAVDCFAA 260
            :........||:||||...:|...|||||:|.|||:.:.|.|.|| |...|..|.::..|:.|:.
Mouse   125 MKKQDFAHVLDVNLLGLIEVTLSMLPLVRKARGRVINVASVLGRV-SLCGGAYCISKYGVEAFSD 188

  Fly   261 CLRQEMRTRGVDVSVVAAGEFAPGNGWLNETELRDQAKQMWNQLSSEQKKTYGEDYYEAAMTSVE 325
            .||:|:...||.|:::..|.|.  .|..:...|....:.:|:|.|||.::.|||.|..:.:..:.
Mouse   189 SLRRELSYFGVKVAIIEPGFFL--TGVTSSARLCSNTQMLWDQTSSEIREIYGEKYLASYLKRLN 251

  Fly   326 KYSRQA-ADIQPTLRVLIDAVTRTFPMARYT 355
            :..::. .|:......:..|:|...|..||:
Mouse   252 ELDKRCNKDLSLVTDCMEHALTACHPRTRYS 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 Rossmann-fold NAD(P)(+)-binding proteins 96..380 CDD:473865 86/262 (33%)
Rdh9NP_694773.1 type2_17beta_HSD-like_SDR_c 30..306 CDD:187665 86/262 (33%)

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