DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8888 and hsd17b2

DIOPT Version :9

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:XP_002934996.2 Gene:hsd17b2 / 100497002 XenbaseID:XB-GENE-1011810 Length:381 Species:Xenopus tropicalis


Alignment Length:364 Identity:108/364 - (29%)
Similarity:179/364 - (49%) Gaps:57/364 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 LFCQAAAIVTSHLLHAL-------------DISSISTFAVFVWFALA--------TVGAVLFYHF 88
            |:.......:...||.|             .:.|:....:|.:|.|:        |:...::|:.
 Frog     9 LYLAVGVFFSGSALHKLMKNKVKIENASVSGLLSLLILGIFCFFVLSDTAGLTLLTLACTIYYYS 73

  Fly    89 VKV----SASGKGVLITGCEAPLAWYLAKKLDDLGFTVYAGFNTPIEESDEAKILKEVTSGRMKL 149
            :.|    ||.||.||||||::.....|||.||.||..|:||...  ::...|:.||.|.|..:.|
 Frog    74 IPVRDMLSAEGKSVLITGCDSGFGHALAKHLDKLGVHVFAGVLD--KKGPGAEELKRVCSTHLCL 136

  Fly   150 LHLDVTSEKTILEAARYVSQHLPHGAEGLWSVVHCA---HWIALGELEWIPFAVLRKSLDLNLLG 211
            :.|::|:.:.|.:|.:.:|.::...  |||.:||.|   .::|.|||  |||:|.|:.:::|.||
 Frog   137 IQLNITNCEEIRKAYKEISSYIQDA--GLWGIVHNAGVLGYVADGEL--IPFSVYRQCMEVNFLG 197

  Fly   212 SARLTQIFLPLVRRAHGRVVFLTSGLNRVPSPVRGIQCATQAAVDCFAACLRQEMRTRGVDVSVV 276
            :.::||||.||:|::.||:|.::|....||........:::||:..|:|.:||::...||.|:||
 Frog   198 AVQVTQIFAPLLRKSKGRLVSISSMGGHVPLNGFAAYASSKAALSMFSAVMRQDLSKWGVKVAVV 262

  Fly   277 AAGEFAPGNGWLNETEL-RDQAKQMWNQLSSEQKKTYGEDYYE---AAMTSVEKYSRQAADIQPT 337
            ....|        .|.: ..|.:.:.:.:..:.|:.|||||.|   ....::.|:.  ::|:.|.
 Frog   263 CPSGF--------RTNIFGSQNQVILDNVMPDVKEDYGEDYIENLKGLYHTLHKFG--SSDLSPV 317

  Fly   338 LRVLIDAVTRTFPMARYTPVTSSERLQIFLAEHLAPSLY 376
            :.....|:....|...|||    .||     .:|.|.||
 Frog   318 MEDACHALLAQTPNFLYTP----GRL-----AYLIPCLY 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 NADB_Rossmann 96..380 CDD:304358 94/288 (33%)
adh_short 96..293 CDD:278532 72/199 (36%)
hsd17b2XP_002934996.2 NADB_Rossmann 85..356 CDD:419666 94/288 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 131 1.000 Domainoid score I5092
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D370032at33208
OrthoFinder 1 1.000 - - FOG0000161
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X110
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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