DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8888 and rdh7.2

DIOPT Version :10

Sequence 1:NP_610724.1 Gene:CG8888 / 36293 FlyBaseID:FBgn0033679 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001107972.1 Gene:rdh7.2 / 100135028 XenbaseID:XB-GENE-1007886 Length:317 Species:Xenopus tropicalis


Alignment Length:298 Identity:93/298 - (31%)
Similarity:148/298 - (49%) Gaps:32/298 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 KGVLITGCEAPLAWYLAKKLDDLGFTVYAGFNTPIEESDEAKILKEVTSGRMKLLHLDVTSEKTI 160
            |.||||||::.....||:.||..|..|.|...|    ...|:.||:.||.|::.:.||||...::
 Frog    30 KYVLITGCDSGFGNLLARNLDRRGIRVLAACLT----DRGAEELKKQTSDRLQTVLLDVTDSNSV 90

  Fly   161 LEAARYVSQHLPHGAEGLWSVVH-------CAHWIALGELEWIPFAVLRKSLDLNLLGSARLTQI 218
            ..||.:.||.:  |.:|||.:|:       ||      ..||:......|.:::||||...:|..
 Frog    91 KTAANWASQIV--GDKGLWGLVNNAGISFPCA------PNEWLTKEDFMKVMNVNLLGLIDVTIN 147

  Fly   219 FLPLVRRAHGRVVFLTSGLNRVPSPVRGIQCATQAAVDCFAACLRQEMRTRGVDVSVVAAGEFAP 283
            .|.|:|:|.||||.:.|...|:.....| .|.::..|:.|:..||:|||..||.|.:|..|.|  
 Frog   148 MLHLIRKARGRVVNIASVAGRITISGGG-YCMSKYGVESFSDSLRREMRPFGVKVCIVEPGFF-- 209

  Fly   284 GNGWLNETELRDQA-KQMWNQLSSEQKKTYGEDYYE----AAMTSVEKYSRQAADIQPTLRVLID 343
             ...:..|:|..|: ::.||..:.|.:::||::|::    |:.|.|....   |::......|..
 Frog   210 -KTQITNTDLVKQSLERAWNSTTEEIRQSYGQEYFKKSCNASQTIVPLCK---ANLSLVTDCLEH 270

  Fly   344 AVTRTFPMARYTPVTSSERLQIFLAEHLAPSLYESLYG 381
            |:|...|..||:....::.|.:.|: :...|:.:.|.|
 Frog   271 ALTAAHPRTRYSAGWDAKLLFLPLS-YFPTSVVDFLLG 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8888NP_610724.1 Rossmann-fold NAD(P)(+)-binding proteins 96..380 CDD:473865 91/295 (31%)
rdh7.2NP_001107972.1 type2_17beta_HSD-like_SDR_c 30..306 CDD:187665 91/295 (31%)

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