DRSC/TRiP Functional Genomics Resources

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Protein Alignment Drep3 and Cidec

DIOPT Version :10

Sequence 1:NP_610722.2 Gene:Drep3 / 36292 FlyBaseID:FBgn0028407 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001019504.2 Gene:Cidec / 500292 RGDID:1562113 Length:248 Species:Rattus norvegicus


Alignment Length:198 Identity:49/198 - (24%)
Similarity:89/198 - (44%) Gaps:31/198 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LDDAADSITL--ELALSPH-SSATPTPSPTTADEDFAQLDNSKPFKIKDITRNIRKAVVATTLSE 141
            :|.|..|::|  ..:||.| :.:|...:.....|...:...::|.::....|.:||.::|.:|.:
  Rat    11 MDYAMKSLSLLYPRSLSRHVAVSTAVVTQQLVSEPSRETPRARPCRVSTADRKVRKGIMAHSLED 75

  Fly   142 LRTKVS--LKFERAQPAIHLDCDGTEVDDEEYFSTLEPNAELIAVFPGEQWRDPSDYNANLRRTS 204
            |..||.  ||.:....::.|:.|||.|:.||||..|..:...:.:..|::|:.||:......:.|
  Rat    76 LLGKVQDILKLKDKPFSLVLEEDGTIVETEEYFQALPRDTVFMVLQKGQKWKSPSEQRKKKAQLS 140

  Fly   205 LDAQRLRSL-VSKLQPNYMNDDDLDKLSNMDPNSLVDITGREPKD-----NEYSARSDAARLSTE 263
            |..:..:.: |:::      ..||.||:              |:|     |..:...|...||.:
  Rat   141 LSQKPTKKIDVARV------TFDLYKLN--------------PQDFIGCLNVKATLYDTYSLSYD 185

  Fly   264 LSC 266
            |.|
  Rat   186 LHC 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Drep3NP_610722.2 CIDE_N 119..192 CDD:119367 23/74 (31%)
CidecNP_001019504.2 CIDE_N 51..130 CDD:470607 23/78 (29%)

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