Sequence 1: | NP_523706.1 | Gene: | RpIII128 / 36289 | FlyBaseID: | FBgn0004463 | Length: | 1137 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_060552.4 | Gene: | POLR3B / 55703 | HGNCID: | 30348 | Length: | 1133 | Species: | Homo sapiens |
Alignment Length: | 1117 | Identity: | 772/1117 - (69%) |
---|---|---|---|
Similarity: | 929/1117 - (83%) | Gaps: | 6/1117 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 SVPIKPLTEKWKLVPAFLQVKGLVKQHIDSFNHFINVDIKKIVKANELVTSGADPLFYLKYLDVR 89
Fly 90 VGKPDIDDGFNITKATTPHECRLRDTTYSAPITVDIEYTRGTQRIKRNNLLIGRMPLMLRCSNCA 154
Fly 155 LTGKSEFELSKLNECPLDPGGYFVVRGQEKVILIQEQLSWNKMLTE-DFNGVVQCQVTSSTHEKK 218
Fly 219 SRTLVLSKHGKYYLKHNSMTDDIPIVVIFKALGVVSDQEIQSLIGIDSKSQNRFGASLIDAYNLK 283
Fly 284 VFTQQRALEYMGSKLVVKR-FQSATTKTPSEEARELLLTTILAHVPVDNFNLQMKAIYVSMMVRR 347
Fly 348 VMAAELDKTLFDDRDYYGNKRLELAGSLLSMMFEDLFKRMNWELKTIADKNIPKVKAAQFDVVKH 412
Fly 413 MRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNSQFEKTRKVSGPRS 477
Fly 478 LQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTEVEERPVMIVAFNAGVEDIREVSGNPINNPN 542
Fly 543 VFLVFINGNVLGLTLNHKHLVRNLRYMRRKGRMGSYVSVHTSYTQRCIYIHTDGGRLCRPYVIVE 607
Fly 608 NRRPLVKQHHLDELNRGIRKFDDFLLDGLIEYLDVNEENDSFIAWNEDQIEDRTTHLEIEPFTLL 672
Fly 673 GVCAGLVPYPHHNQSPRNTYQCAMGKQAMGMIGYNQKNRIDSLMYNLVYPHAPMVKSKTIELTNF 737
Fly 738 DKLPAGQNATVAVMSYSGYDIEDALILNKASIDRGYGRCLVYKNSKCTVKRYANQTFDRIMGPMK 802
Fly 803 DALTNKVIFKHDVLDTDGIVAPGEQVQNKQIMINKEMPAVTSMNPLQGQSA--QVPYTAVPISYK 865
Fly 866 GPEPSYIERVMVSANAEEDFLIKILLRQTRIPEIGDKFSSRHGQKGVTGLIVEQEDMPFNDFGIC 930
Fly 931 PDMIMNPHGFPSRMTVGKTLELLGGKAGLLEGKFHYGTAFGGSKVEDIQAELERHGFNYVGKDFF 995
Fly 996 YSGITGTPLEAYIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDC 1060
Fly 1061 LISYGASMLIMERLMISSDAFEVDVCRTCGRMAYCSWCHFCQSSANVSKISMPYACKLLFQELTS 1125
Fly 1126 MNVVPKMILENY 1137 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpIII128 | NP_523706.1 | PRK08565 | 34..1135 | CDD:236291 | 767/1104 (69%) |
RNA_pol_B_RPB2 | 47..1133 | CDD:238353 | 757/1089 (70%) | ||
RNA_pol_Rpb2_2 | 210..370 | CDD:282427 | 87/160 (54%) | ||
RNA_pol_Rpb2_4 | 546..607 | CDD:282431 | 34/60 (57%) | ||
RNA_pol_Rpb2_5 | 628..668 | CDD:282432 | 25/39 (64%) | ||
POLR3B | NP_060552.4 | RNA_pol_B_RPB2 | 39..1127 | CDD:238353 | 757/1089 (70%) |
RNA_pol_Rpb2_4 | 539..600 | CDD:398322 | 34/60 (57%) | ||
RNA_pol_Rpb2_5 | 621..661 | CDD:398323 | 25/39 (64%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165147095 | |
Domainoid | 1 | 1.000 | 600 | 1.000 | Domainoid score | I196 |
eggNOG | 1 | 0.900 | - | - | E1_COG0085 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H6981 | |
Inparanoid | 1 | 1.050 | 1588 | 1.000 | Inparanoid score | I85 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S207 |
OMA | 1 | 1.010 | - | - | QHG54037 | |
OrthoDB | 1 | 1.010 | - | - | D42570at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000346 | |
OrthoInspector | 1 | 1.000 | - | - | oto90669 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100190 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR20856 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1190 |
SonicParanoid | 1 | 1.000 | - | - | X610 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
17 | 16.750 |