Sequence 1: | NP_523706.1 | Gene: | RpIII128 / 36289 | FlyBaseID: | FBgn0004463 | Length: | 1137 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_000929.1 | Gene: | POLR2B / 5431 | HGNCID: | 9188 | Length: | 1174 | Species: | Homo sapiens |
Alignment Length: | 1169 | Identity: | 436/1169 - (37%) |
---|---|---|---|
Similarity: | 686/1169 - (58%) | Gaps: | 93/1169 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 WKLVPAFLQVKGLVKQHIDSFNHFINVDIKKIV--------KANELVTSG---ADPLFYLKYLDV 88
Fly 89 RVGKPDIDDGFNITKATTPHECRLRDTTYSAPITVDIEYT---RGTQRI--KRNNLLIGRMPLML 148
Fly 149 RCSNCALTGKSEFELSKLNECPLDPGGYFVVRGQEKVILIQEQLSWNKMLT---ED----FNGVV 206
Fly 207 QCQVTSSTHEKKSRTL---VLSKHGK---------------YYLKHNSMTDDIPIVVIFKALGVV 253
Fly 254 SDQEIQSLIGI---DSKSQNRFGASLIDAYNLKVFTQQRALEYMGSKLVVKRFQSATTKTPSEEA 315
Fly 316 RELLLTTILAHVPVDNFNLQMKAIYVSMMVRRVMAAELDKTLFDDRDYYGNKRLELAGSLLSMMF 380
Fly 381 EDLFKRMNWELKTIADKNIPKVKAAQFDVVKHMRAAQITAGLESAISSGNW-TIKRFKMERAGVT 444
Fly 445 QVLSRLSYISALGMMTRVNSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHI 509
Fly 510 TTEVEERPVMIVAFNAGVEDIREVSGNPINNPNVFLVFINGNVLGLTLNHKHLVRNLRYMRRK-G 573
Fly 574 RMGSYVSVHTSYTQRCIYIHTDGGRLCRPYVIVENRRPLVKQHHLDELNRGIRKFD-----DFLL 633
Fly 634 DGLIEYLDVNEENDSFIAWNEDQIEDRT-------THLEIEPFTLLGVCAGLVPYPHHNQSPRNT 691
Fly 692 YQCAMGKQAMGMIGYNQKNRIDSLMYNLVYPHAPMVKSKTIELTNFDKLPAGQNATVAVMSYSGY 756
Fly 757 DIEDALILNKASIDRGYGRCLVYKNSKCTVKRYANQTFDR---IMGPMKDALTNKVIFKHDVLDT 818
Fly 819 DGIVAPGEQVQNKQIMINKEMPAVTSMNPLQGQSAQVPYTAVPIS--YKGPEPSYIERVMVSANA 881
Fly 882 EEDFLIKILLRQTRIPEIGDKFSSRHGQKGVTGLIVEQEDMPFNDFGICPDMIMNPHGFPSRMTV 946
Fly 947 GKTLELLGGKAGLLEGKFHYGTAFGGS-KVEDIQAELERHGFNYVGKDFFYSGITGTPLEAYIYS 1010
Fly 1011 GPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLM 1075
Fly 1076 ISSDAFEVDVCRTCGRMAYCSW------CHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMI 1133 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RpIII128 | NP_523706.1 | PRK08565 | 34..1135 | CDD:236291 | 436/1169 (37%) |
RNA_pol_B_RPB2 | 47..1133 | CDD:238353 | 432/1155 (37%) | ||
RNA_pol_Rpb2_2 | 210..370 | CDD:282427 | 50/180 (28%) | ||
RNA_pol_Rpb2_4 | 546..607 | CDD:282431 | 23/61 (38%) | ||
RNA_pol_Rpb2_5 | 628..668 | CDD:282432 | 13/51 (25%) | ||
POLR2B | NP_000929.1 | PRK08565 | 27..1172 | CDD:236291 | 435/1167 (37%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D42570at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000346 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100190 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X610 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |