DRSC/TRiP Functional Genomics Resources

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Protein Alignment 128up and AT4G39520

DIOPT Version :10

Sequence 1:NP_536733.1 Gene:128up / 36288 FlyBaseID:FBgn0010339 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_195662.1 Gene:AT4G39520 / 830106 AraportID:AT4G39520 Length:369 Species:Arabidopsis thaliana


Alignment Length:370 Identity:256/370 - (69%)
Similarity:312/370 - (84%) Gaps:3/370 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTILEKISAIESEMARTQKNKATSAHLGLLKAKLAKLRRELISP--KGGGGGTGEAGFEVAKTG 63
            ||||::||..||.|||:||||||||.||||||||||||||:|::|  ||||||.|| ||:|.|:|
plant     1 MSTIMQKIKEIEDEMAKTQKNKATSHHLGLLKAKLAKLRRDLLAPPTKGGGGGAGE-GFDVTKSG 64

  Fly    64 DARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEGAKDG 128
            |:|||.||||||||||||:.|.|.:||||:|||||||.:||.|.|:|||||||||||||||||||
plant    65 DSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIEGAKDG 129

  Fly   129 KGRGRQVIAVARTCNLIFMVLDCLKPLGHKKLLEHELEGFGIRLNKKPPNIYYKRKDKGGINLNS 193
            ||||||||:.|||||.|.:|||.:||:.||:|:|.|||||||||||:|||:.:::||||||||.|
plant   130 KGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLTFRKKDKGGINLTS 194

  Fly   194 MVPQSELDTDLVKTILSEYKIHNADITLRYDATSDDLIDVIEGNRIYIPCIYLLNKIDQISIEEL 258
            .|..:.||.|.||.|..||::||||||||||||:|||||||||:|||:||||.:||||.|::|||
plant   195 TVAVTHLDLDTVKAICGEYRMHNADITLRYDATADDLIDVIEGSRIYMPCIYAVNKIDSITLEEL 259

  Fly   259 DVIYKIPHCVPISAHHHWNFDDLLELMWEYLRLQRIYTKPKGQLPDYNSPVVLHNERTSIEDFCN 323
            :::.|:||..|:|||..||.|.||:.:||||.|.|||||||...|||:.||:|.:::.::||||.
plant   260 EILDKLPHYCPVSAHLEWNLDGLLDKIWEYLDLTRIYTKPKAMNPDYDDPVILSSKKRTVEDFCI 324

  Fly   324 KLHRSIAKEFKYALVWGSSVKHQPQKVGIEHVLNDEDVVQIVKKV 368
            ::|:.:.|:||||||||||.||:||:||.||.|.||||||||||:
plant   325 RIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIVKKI 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
128upNP_536733.1 Rbg1 1..367 CDD:440777 254/367 (69%)
AT4G39520NP_195662.1 Rbg1 1..368 CDD:440777 254/367 (69%)

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