DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 128up and CG6195

DIOPT Version :10

Sequence 1:NP_536733.1 Gene:128up / 36288 FlyBaseID:FBgn0010339 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_650822.1 Gene:CG6195 / 42343 FlyBaseID:FBgn0038723 Length:363 Species:Drosophila melanogaster


Alignment Length:366 Identity:206/366 - (56%)
Similarity:270/366 - (73%) Gaps:7/366 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILEKISAIESEMARTQKNKATSAHLGLLKAKLAKLRRELISP--KGGGGGTGEAGFEVAKTGDAR 66
            |||||:.||.|:|||||||||..|||||||||||.|.:|:.|  ||..|.    ||:|.|:||||
  Fly     3 ILEKIAEIEREIARTQKNKATEYHLGLLKAKLAKYRSQLLEPSKKGEKGD----GFDVLKSGDAR 63

  Fly    67 VGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEGAKDGKGR 131
            |..:|||||||||:||.|....||.|.|||||||.:||.|:|:||.|||||||||||||..||||
  Fly    64 VALIGFPSVGKSTMLSTLTKTESEAANYEFTTLTCIPGVIEYQGANIQLLDLPGIIEGAAQGKGR 128

  Fly   132 GRQVIAVARTCNLIFMVLDCLKPLGHKKLLEHELEGFGIRLNKKPPNIYYKRKDKGGINLNSMVP 196
            ||||||||||.:|:.|:||..||..|::|||.|||..||||||:.||||:|:|..||::.|:...
  Fly   129 GRQVIAVARTADLVLMMLDATKPNVHRELLERELESVGIRLNKRKPNIYFKQKKGGGLSFNATCS 193

  Fly   197 QSELDTDLVKTILSEYKIHNADITLRYDATSDDLIDVIEGNRIYIPCIYLLNKIDQISIEELDVI 261
            .:..:..:|:|||..:||.||::..|.|.|.|:.|||:..||:|:||:|:.||||||||||:|.:
  Fly   194 LTRCNEKMVQTILHSFKIFNAEVLFREDCTEDEFIDVVTANRVYLPCLYVYNKIDQISIEEVDRL 258

  Fly   262 YKIPHCVPISAHHHWNFDDLLELMWEYLRLQRIYTKPKGQLPDYNSPVVLHNERTSIEDFCNKLH 326
            .:.|:.:.:|.:...|.|.::|.:||.|:|.|:|||..|..||::..::| .:..|:|..|:.:|
  Fly   259 ARQPNSIVVSCNMKLNLDYMMEALWEALQLIRVYTKKPGAPPDFDDGLIL-RKGVSVEHVCHAIH 322

  Fly   327 RSIAKEFKYALVWGSSVKHQPQKVGIEHVLNDEDVVQIVKK 367
            |::|.:||||||||:|.|:.||:|||.||:.||||:|:|||
  Fly   323 RTLAAQFKYALVWGTSTKYSPQRVGIAHVMADEDVIQVVKK 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
128upNP_536733.1 Rbg1 1..367 CDD:440777 204/364 (56%)
CG6195NP_650822.1 Rbg1 1..363 CDD:440777 204/364 (56%)

Return to query results.
Submit another query.