DRSC/TRiP Functional Genomics Resources

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Protein Alignment 128up and C02F5.13

DIOPT Version :9

Sequence 1:NP_536733.1 Gene:128up / 36288 FlyBaseID:FBgn0010339 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001021138.1 Gene:C02F5.13 / 3565859 WormBaseID:WBGene00015353 Length:210 Species:Caenorhabditis elegans


Alignment Length:141 Identity:35/141 - (24%)
Similarity:43/141 - (30%) Gaps:58/141 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GTGEAGFEVAKTGDARVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFT----------------TL 99
            |.|:.|.:.|..        .|.:.||..   .:.|..:|  ..|||                |.
 Worm    81 GPGQTGQQPANE--------SFRNEGKCL---KMGGYRAE--DVEFTNVKCRVLPCIECHGPRTF 132

  Fly   100 TTVPGCIKYKGAKIQLLDLPGIIEGAKDGKGRGRQVIAVARTCNLIFMVLDCLKPLGHK-----K 159
            |....||.|.|.......|..|..|          |:||.|.|            ||:.     |
 Worm   133 TKSTPCIIYNGHYFLTTLLYSIFLG----------VVAVDRFC------------LGYSAMAVGK 175

  Fly   160 LLEHELEGFGI 170
            |:  .|.||||
 Worm   176 LM--TLGGFGI 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
128upNP_536733.1 Rbg1 1..367 CDD:224085 35/141 (25%)
C02F5.13NP_001021138.1 TM2 142..191 CDD:282945 18/67 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1163
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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