DRSC/TRiP Functional Genomics Resources

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Protein Alignment 128up and drg1

DIOPT Version :10

Sequence 1:NP_536733.1 Gene:128up / 36288 FlyBaseID:FBgn0010339 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_956332.1 Gene:drg1 / 336823 ZFINID:ZDB-GENE-030131-8767 Length:366 Species:Danio rerio


Alignment Length:366 Identity:302/366 - (82%)
Similarity:338/366 - (92%) Gaps:2/366 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILEKISAIESEMARTQKNKATSAHLGLLKAKLAKLRRELISPKGG-GGGTGEAGFEVAKTGDAR 66
            ::|.||:.||:|||||||||||:.|||||||:|||||||||:|||| |||||| ||:||||||||
Zfish     2 SLLAKIAEIENEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGSGGGTGE-GFDVAKTGDAR 65

  Fly    67 VGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEGAKDGKGR 131
            :|||||||||||||||||||||||||||||||||||||.|:||||||||||||||||||||||||
Zfish    66 IGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAKDGKGR 130

  Fly   132 GRQVIAVARTCNLIFMVLDCLKPLGHKKLLEHELEGFGIRLNKKPPNIYYKRKDKGGINLNSMVP 196
            ||||||||||||||.:|||.|||||||||:|||||||||||||:||||.:|:|||||||..:...
Zfish   131 GRQVIAVARTCNLILIVLDVLKPLGHKKLIEHELEGFGIRLNKQPPNIGFKKKDKGGINFTATCA 195

  Fly   197 QSELDTDLVKTILSEYKIHNADITLRYDATSDDLIDVIEGNRIYIPCIYLLNKIDQISIEELDVI 261
            |||||.|.||:|||||||||||||||.|||:||||||:||||:||||||:|||||||||||||||
Zfish   196 QSELDGDTVKSILSEYKIHNADITLRSDATADDLIDVVEGNRVYIPCIYVLNKIDQISIEELDVI 260

  Fly   262 YKIPHCVPISAHHHWNFDDLLELMWEYLRLQRIYTKPKGQLPDYNSPVVLHNERTSIEDFCNKLH 326
            |||||||||||||.||||||||.:|:||:|.|||||||||||||.:||||.:.||::||||.|:|
Zfish   261 YKIPHCVPISAHHRWNFDDLLEKIWDYLQLVRIYTKPKGQLPDYTAPVVLPDGRTAVEDFCLKIH 325

  Fly   327 RSIAKEFKYALVWGSSVKHQPQKVGIEHVLNDEDVVQIVKK 367
            :::.|||||||||||||||.|||||.:||:.||||:|:|||
Zfish   326 KNLIKEFKYALVWGSSVKHNPQKVGKDHVMEDEDVIQLVKK 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
128upNP_536733.1 Rbg1 1..367 CDD:440777 300/364 (82%)
drg1NP_956332.1 Rbg1 1..366 CDD:440777 300/364 (82%)

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