DRSC/TRiP Functional Genomics Resources

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Protein Alignment 128up and drg1

DIOPT Version :9

Sequence 1:NP_536733.1 Gene:128up / 36288 FlyBaseID:FBgn0010339 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_956332.1 Gene:drg1 / 336823 ZFINID:ZDB-GENE-030131-8767 Length:366 Species:Danio rerio


Alignment Length:366 Identity:302/366 - (82%)
Similarity:338/366 - (92%) Gaps:2/366 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILEKISAIESEMARTQKNKATSAHLGLLKAKLAKLRRELISPKGG-GGGTGEAGFEVAKTGDAR 66
            ::|.||:.||:|||||||||||:.|||||||:|||||||||:|||| |||||| ||:||||||||
Zfish     2 SLLAKIAEIENEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGSGGGTGE-GFDVAKTGDAR 65

  Fly    67 VGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEGAKDGKGR 131
            :|||||||||||||||||||||||||||||||||||||.|:||||||||||||||||||||||||
Zfish    66 IGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAKDGKGR 130

  Fly   132 GRQVIAVARTCNLIFMVLDCLKPLGHKKLLEHELEGFGIRLNKKPPNIYYKRKDKGGINLNSMVP 196
            ||||||||||||||.:|||.|||||||||:|||||||||||||:||||.:|:|||||||..:...
Zfish   131 GRQVIAVARTCNLILIVLDVLKPLGHKKLIEHELEGFGIRLNKQPPNIGFKKKDKGGINFTATCA 195

  Fly   197 QSELDTDLVKTILSEYKIHNADITLRYDATSDDLIDVIEGNRIYIPCIYLLNKIDQISIEELDVI 261
            |||||.|.||:|||||||||||||||.|||:||||||:||||:||||||:|||||||||||||||
Zfish   196 QSELDGDTVKSILSEYKIHNADITLRSDATADDLIDVVEGNRVYIPCIYVLNKIDQISIEELDVI 260

  Fly   262 YKIPHCVPISAHHHWNFDDLLELMWEYLRLQRIYTKPKGQLPDYNSPVVLHNERTSIEDFCNKLH 326
            |||||||||||||.||||||||.:|:||:|.|||||||||||||.:||||.:.||::||||.|:|
Zfish   261 YKIPHCVPISAHHRWNFDDLLEKIWDYLQLVRIYTKPKGQLPDYTAPVVLPDGRTAVEDFCLKIH 325

  Fly   327 RSIAKEFKYALVWGSSVKHQPQKVGIEHVLNDEDVVQIVKK 367
            :::.|||||||||||||||.|||||.:||:.||||:|:|||
Zfish   326 KNLIKEFKYALVWGSSVKHNPQKVGKDHVMEDEDVIQLVKK 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
128upNP_536733.1 Rbg1 1..367 CDD:224085 300/364 (82%)
drg1NP_956332.1 Rbg1 1..366 CDD:224085 300/364 (82%)
DRG 64..296 CDD:206683 200/231 (87%)
TGS_DRG_C 290..365 CDD:133436 53/74 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585916
Domainoid 1 1.000 188 1.000 Domainoid score I3258
eggNOG 1 0.900 - - E1_COG1163
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3060
Inparanoid 1 1.050 616 1.000 Inparanoid score I866
OMA 1 1.010 - - QHG60797
OrthoDB 1 1.010 - - D348788at33208
OrthoFinder 1 1.000 - - FOG0001080
OrthoInspector 1 1.000 - - oto40480
orthoMCL 1 0.900 - - OOG6_102018
Panther 1 1.100 - - LDO PTHR43127
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1835
SonicParanoid 1 1.000 - - X3699
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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