DRSC/TRiP Functional Genomics Resources

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Protein Alignment 128up and Drg1

DIOPT Version :9

Sequence 1:NP_536733.1 Gene:128up / 36288 FlyBaseID:FBgn0010339 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001009685.1 Gene:Drg1 / 305470 RGDID:1304993 Length:367 Species:Rattus norvegicus


Alignment Length:367 Identity:297/367 - (80%)
Similarity:333/367 - (90%) Gaps:0/367 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTILEKISAIESEMARTQKNKATSAHLGLLKAKLAKLRRELISPKGGGGGTGEAGFEVAKTGDA 65
            ||..|.||:.||:|||||||||||:.|||||||:|||||||||:|||||||....||:|||||||
  Rat     1 MSGTLAKIAEIEAEMARTQKNKATAHHLGLLKARLAKLRRELITPKGGGGGGPGEGFDVAKTGDA 65

  Fly    66 RVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEGAKDGKG 130
            |:|||||||||||||||||||||||||||||||||||||.|:|||||||||||||||||||||||
  Rat    66 RIGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAKDGKG 130

  Fly   131 RGRQVIAVARTCNLIFMVLDCLKPLGHKKLLEHELEGFGIRLNKKPPNIYYKRKDKGGINLNSMV 195
            |||||||||||||||.:|||.||||||||::|:||||||||||.|||||.:|:||||||||.:..
  Rat   131 RGRQVIAVARTCNLILIVLDVLKPLGHKKIIENELEGFGIRLNSKPPNIGFKKKDKGGINLTATC 195

  Fly   196 PQSELDTDLVKTILSEYKIHNADITLRYDATSDDLIDVIEGNRIYIPCIYLLNKIDQISIEELDV 260
            ||||||.:.||:||:||||||||:|||.|||:||||||:||||:||||||:|||||||||||||:
  Rat   196 PQSELDAETVKSILAEYKIHNADVTLRSDATADDLIDVVEGNRVYIPCIYVLNKIDQISIEELDI 260

  Fly   261 IYKIPHCVPISAHHHWNFDDLLELMWEYLRLQRIYTKPKGQLPDYNSPVVLHNERTSIEDFCNKL 325
            |||:||||||||||.||||||||.:|:||:|.|||||||||||||.|||||...||::||||.|:
  Rat   261 IYKVPHCVPISAHHRWNFDDLLEKIWDYLKLVRIYTKPKGQLPDYTSPVVLPYSRTTVEDFCMKI 325

  Fly   326 HRSIAKEFKYALVWGSSVKHQPQKVGIEHVLNDEDVVQIVKK 367
            |:::.||||||||||.||||.|||||.:|.|.||||:|||||
  Rat   326 HKNLIKEFKYALVWGLSVKHNPQKVGKDHTLEDEDVIQIVKK 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
128upNP_536733.1 Rbg1 1..367 CDD:224085 295/365 (81%)
Drg1NP_001009685.1 Rbg1 1..367 CDD:224085 295/365 (81%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344930
Domainoid 1 1.000 189 1.000 Domainoid score I3213
eggNOG 1 0.900 - - E1_COG1163
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3060
Inparanoid 1 1.050 614 1.000 Inparanoid score I868
OMA 1 1.010 - - QHG60797
OrthoDB 1 1.010 - - D348788at33208
OrthoFinder 1 1.000 - - FOG0001080
OrthoInspector 1 1.000 - - oto97236
orthoMCL 1 0.900 - - OOG6_102018
Panther 1 1.100 - - LDO PTHR43127
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3699
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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