DRSC/TRiP Functional Genomics Resources

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Protein Alignment 128up and SPAC9.07c

DIOPT Version :9

Sequence 1:NP_536733.1 Gene:128up / 36288 FlyBaseID:FBgn0010339 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_593350.1 Gene:SPAC9.07c / 2543662 PomBaseID:SPAC9.07c Length:366 Species:Schizosaccharomyces pombe


Alignment Length:367 Identity:234/367 - (63%)
Similarity:297/367 - (80%) Gaps:1/367 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTILEKISAIESEMARTQKNKATSAHLGLLKAKLAKLRRELISPKGGGGGTGEAGFEVAKTGDA 65
            |:|..:||..:|.|||:|||||||:.|||:||||||||:||||:|.||||| |..||:||:||..
pombe     1 MATTAQKIKEVEDEMAKTQKNKATAKHLGMLKAKLAKLKRELITPTGGGGG-GGLGFDVARTGIG 64

  Fly    66 RVGFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEGAKDGKG 130
            .|||:||||||||||::.|.|..||.|||||||||||||.::|.|||||:|||||||||||||:|
pombe    65 TVGFIGFPSVGKSTLMTQLTGTRSEAAAYEFTTLTTVPGVLQYNGAKIQILDLPGIIEGAKDGRG 129

  Fly   131 RGRQVIAVARTCNLIFMVLDCLKPLGHKKLLEHELEGFGIRLNKKPPNIYYKRKDKGGINLNSMV 195
            ||:|||.|||||||||:|||.|||:.||:::|.|||||||||||:||||.:|:|::||||:.:.|
pombe   130 RGKQVITVARTCNLIFIVLDVLKPMSHKRIIEEELEGFGIRLNKEPPNIVFKKKERGGINITNTV 194

  Fly   196 PQSELDTDLVKTILSEYKIHNADITLRYDATSDDLIDVIEGNRIYIPCIYLLNKIDQISIEELDV 260
            |.:.:|.|.::.:.|||::::|||..|.|||.||||||:||||:|||.:|:|||||.|||||||:
pombe   195 PLTHIDLDEIRAVCSEYRVNSADIAFRCDATIDDLIDVLEGNRVYIPALYVLNKIDSISIEELDL 259

  Fly   261 IYKIPHCVPISAHHHWNFDDLLELMWEYLRLQRIYTKPKGQLPDYNSPVVLHNERTSIEDFCNKL 325
            |.:||:.|||..:..||.|:|.|.||:||.|.|:||:|:|..|||:.||:|....:::|||||.:
pombe   260 IDRIPNAVPICGNRGWNIDELKETMWDYLNLVRVYTRPRGLEPDYSEPVILRTGHSTVEDFCNNI 324

  Fly   326 HRSIAKEFKYALVWGSSVKHQPQKVGIEHVLNDEDVVQIVKK 367
            |.||..:||:|.|||.||.:...:||:.|||.|||||.||||
pombe   325 HSSIKSQFKHAYVWGKSVPYPGMRVGLSHVLLDEDVVTIVKK 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
128upNP_536733.1 Rbg1 1..367 CDD:224085 232/365 (64%)
SPAC9.07cNP_593350.1 Rbg1 1..366 CDD:224085 232/365 (64%)
DRG 65..295 CDD:206683 151/229 (66%)
TGS_DRG_C 290..365 CDD:133436 39/74 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 167 1.000 Domainoid score I929
eggNOG 1 0.900 - - E1_COG1163
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3060
Inparanoid 1 1.050 498 1.000 Inparanoid score I245
OMA 1 1.010 - - QHG60797
OrthoFinder 1 1.000 - - FOG0001080
OrthoInspector 1 1.000 - - oto101317
orthoMCL 1 0.900 - - OOG6_102018
Panther 1 1.100 - - LDO PTHR43127
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1835
SonicParanoid 1 1.000 - - X3699
TreeFam 1 0.960 - -
1413.860

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