DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 128up and DRG2

DIOPT Version :9

Sequence 1:NP_536733.1 Gene:128up / 36288 FlyBaseID:FBgn0010339 Length:368 Species:Drosophila melanogaster
Sequence 2:XP_005256556.1 Gene:DRG2 / 1819 HGNCID:3030 Length:385 Species:Homo sapiens


Alignment Length:385 Identity:214/385 - (55%)
Similarity:265/385 - (68%) Gaps:23/385 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILEKISAIESEMARTQKNKATSAHLGLLKAKLAKLRRELISPKGGGGGTGEAGFEVAKTGDARVG 68
            ||||||.||.|:|||||||||..|||||||||||.|.:|:.|.......|| ||:|.|:|||||.
Human     3 ILEKISEIEKEIARTQKNKATEYHLGLLKAKLAKYRAQLLEPSKSASSKGE-GFDVMKSGDARVA 66

  Fly    69 FVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEGAKDGKGRGR 133
            .:|||||||||.||.:....||.|:|||||||.:||.|:||||.|||||||||||||..||||||
Human    67 LIGFPSVGKSTFLSLMTSTASEAASYEFTTLTCIPGVIEYKGANIQLLDLPGIIEGAAQGKGRGR 131

  Fly   134 QVIAVARTCNLIFMVLDCLKPLGHKKLLEHELEGFGIRLNKKPPNIYYKRKDKGGINLNSMVPQS 198
            ||||||||.::|.|:||..|....:.|||.|||..||||||..||||:|.|..|||:.||.|..:
Human   132 QVIAVARTADVIIMMLDATKGEVQRSLLEKELESVGIRLNKHKPNIYFKPKKGGGISFNSTVTLT 196

  Fly   199 ELDTDLVKTILSEYKIHNADITLRYDATSDDLIDVIEGNRIYIPCIYLLNKIDQISIEELDVIYK 263
            :....||:.||.||||.||::..|.|.:.|:.||||.|||:|:||:|:.|||||||:||:|.:.:
Human   197 QCSEKLVQLILHEYKIFNAEVLFREDCSPDEFIDVIVGNRVYMPCLYVYNKIDQISMEEVDRLAR 261

  Fly   264 IPHCVPISAHHHWNFDDLLELMWEYLRLQRIYTKPKGQ---------------------LPDYNS 307
            .|:.|.||.....|.|.|||::||||.|..||||.:||                     .||:..
Human   262 KPNSVVISCGMKLNLDYLLEMLWEYLALTCIYTKKRGQSQDGSVGPDVWLTFSPSCPAERPDFTD 326

  Fly   308 PVVLHNERTSIEDFCNKLHRSIAKEFKYALVWGSSVKHQPQKVGIEHVLNDEDVVQIVKK 367
            .::| .:..|:|..|:::|||:|.:||||||||:|.|:.||:||:.|.:..|||:|||||
Human   327 AIIL-RKGASVEHVCHRIHRSLASQFKYALVWGTSTKYSPQRVGLTHTMEHEDVIQIVKK 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
128upNP_536733.1 Rbg1 1..367 CDD:224085 212/383 (55%)
DRG2XP_005256556.1 Rbg1 1..385 CDD:224085 212/383 (55%)
P-loop_NTPase <3..119 CDD:304359 78/116 (67%)
DRG 63..295 CDD:206683 137/231 (59%)
TGS_DRG_C 289..384 CDD:133436 37/95 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1163
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60797
OrthoDB 1 1.010 - - D348788at33208
OrthoFinder 1 1.000 - - FOG0001080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.830

Return to query results.
Submit another query.