DRSC/TRiP Functional Genomics Resources

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Protein Alignment 128up and T28D6.6

DIOPT Version :10

Sequence 1:NP_536733.1 Gene:128up / 36288 FlyBaseID:FBgn0010339 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001255126.1 Gene:T28D6.6 / 176563 WormBaseID:WBGene00012126 Length:366 Species:Caenorhabditis elegans


Alignment Length:366 Identity:298/366 - (81%)
Similarity:338/366 - (92%) Gaps:1/366 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TILEKISAIESEMARTQKNKATSAHLGLLKAKLAKLRRELISPKGGGGGTGEAGFEVAKTGDARV 67
            ::|:||:.||:|||||||||||:||||:||||||||||:||:|||||||.|| ||:||||||||:
 Worm     2 SVLQKIADIEAEMARTQKNKATNAHLGILKAKLAKLRRDLITPKGGGGGPGE-GFDVAKTGDARI 65

  Fly    68 GFVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEGAKDGKGRG 132
            ||||||||||||||.|||||:||||||||||||||||.|:|||||||||||||||||||||||||
 Worm    66 GFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYKGAKIQLLDLPGIIEGAKDGKGRG 130

  Fly   133 RQVIAVARTCNLIFMVLDCLKPLGHKKLLEHELEGFGIRLNKKPPNIYYKRKDKGGINLNSMVPQ 197
            :|||||||||:||.||||.:|||.||||||:|||||||||||:||||.||||:||||||..:|||
 Worm   131 KQVIAVARTCSLILMVLDVMKPLQHKKLLEYELEGFGIRLNKQPPNIGYKRKEKGGINLTMLVPQ 195

  Fly   198 SELDTDLVKTILSEYKIHNADITLRYDATSDDLIDVIEGNRIYIPCIYLLNKIDQISIEELDVIY 262
            ||||.||||:||:||:||||||||||||||:|||||||||||||||||:|||||||||||||:||
 Worm   196 SELDLDLVKSILAEYRIHNADITLRYDATSEDLIDVIEGNRIYIPCIYVLNKIDQISIEELDIIY 260

  Fly   263 KIPHCVPISAHHHWNFDDLLELMWEYLRLQRIYTKPKGQLPDYNSPVVLHNERTSIEDFCNKLHR 327
            :|||.|||||||.||||||||.:||||.|.|||||||||||||:.|:||:.||.||||.|.|:|:
 Worm   261 RIPHTVPISAHHKWNFDDLLEKVWEYLNLIRIYTKPKGQLPDYSQPIVLNAERKSIEDLCTKIHK 325

  Fly   328 SIAKEFKYALVWGSSVKHQPQKVGIEHVLNDEDVVQIVKKV 368
            |:.|:||.|||||:|.||.||:||.:|||.||||||::|||
 Worm   326 SLQKDFKCALVWGASAKHNPQRVGRDHVLIDEDVVQVIKKV 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
128upNP_536733.1 Rbg1 1..367 CDD:440777 295/363 (81%)
T28D6.6NP_001255126.1 Rbg1 1..365 CDD:440777 295/363 (81%)

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