DRSC/TRiP Functional Genomics Resources

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Protein Alignment 128up and C02F5.3

DIOPT Version :10

Sequence 1:NP_536733.1 Gene:128up / 36288 FlyBaseID:FBgn0010339 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_498808.2 Gene:C02F5.3 / 176163 WormBaseID:WBGene00015346 Length:366 Species:Caenorhabditis elegans


Alignment Length:366 Identity:218/366 - (59%)
Similarity:266/366 - (72%) Gaps:4/366 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILEKISAIESEMARTQKNKATSAHLGLLKAKLAKLRRELISPKGGGGGTGEAGFEVAKTGDARVG 68
            |||||:.||.|::||||||||..|||||||||||.|::|:.|.|.||..|| ||:|.|:|||||.
 Worm     3 ILEKIAEIEHEISRTQKNKATEYHLGLLKAKLAKYRQQLLEPTGKGGAKGE-GFDVMKSGDARVA 66

  Fly    69 FVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEGAKDGKGRGR 133
            .|||||||||||||::...:||.|.|||||||.:||.|.|.||.|||||||||||||..||||||
 Worm    67 MVGFPSVGKSTLLSSMTSTHSEAAGYEFTTLTCIPGVISYNGANIQLLDLPGIIEGASQGKGRGR 131

  Fly   134 QVIAVARTCNLIFMVLDCLKPLGHKKLLEHELEGFGIRLNKKPPNIYYKRKDKGGINLNSMVPQS 198
            |||:||:|.:||.|:||..|....|.|||.|||..||||||||||||.|:|..||:...:.||.:
 Worm   132 QVISVAKTADLILMMLDAGKSDQQKMLLERELEAVGIRLNKKPPNIYVKQKKVGGVKFTNTVPLT 196

  Fly   199 ELDTDLVKTILSEYKIHNADITLRYDATSDDLIDVIEGNRIYIPCIYLLNKIDQISIEELDVIYK 263
            ..:..|:.|:|.||||.|||:..|.|.|.|:.||||:|||:|:.|:|:.||:|||||||:|.:.:
 Worm   197 HCNEKLIMTVLHEYKIFNADVIFREDCTVDEFIDVIQGNRVYMTCLYVYNKVDQISIEEIDRLAR 261

  Fly   264 IPHCVPISAHHHWNFDDLLELMWEYLRLQRIYTKPKGQLPDY--NSPVVLHNERTSIEDFCNKLH 326
            :||.|.||...:.|.|.|||.|||||.|.|:|||..|..||.  ...::|....| ||..|:.||
 Worm   262 MPHHVVISCEMNLNMDYLLEKMWEYLALVRVYTKKPGNAPDLGPEDGIILRGGAT-IEHCCHALH 325

  Fly   327 RSIAKEFKYALVWGSSVKHQPQKVGIEHVLNDEDVVQIVKK 367
            ||||.:.:||:|||:|.|..||:||:.|.|:.|||:|||||
 Worm   326 RSIAAQLRYAIVWGTSTKFSPQRVGLHHKLDHEDVIQIVKK 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
128upNP_536733.1 Rbg1 1..367 CDD:440777 216/364 (59%)
C02F5.3NP_498808.2 Rbg1 1..366 CDD:440777 216/364 (59%)

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