DRSC/TRiP Functional Genomics Resources

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Protein Alignment 128up and C02F5.3

DIOPT Version :9

Sequence 1:NP_536733.1 Gene:128up / 36288 FlyBaseID:FBgn0010339 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_498808.2 Gene:C02F5.3 / 176163 WormBaseID:WBGene00015346 Length:366 Species:Caenorhabditis elegans


Alignment Length:366 Identity:218/366 - (59%)
Similarity:266/366 - (72%) Gaps:4/366 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ILEKISAIESEMARTQKNKATSAHLGLLKAKLAKLRRELISPKGGGGGTGEAGFEVAKTGDARVG 68
            |||||:.||.|::||||||||..|||||||||||.|::|:.|.|.||..|| ||:|.|:|||||.
 Worm     3 ILEKIAEIEHEISRTQKNKATEYHLGLLKAKLAKYRQQLLEPTGKGGAKGE-GFDVMKSGDARVA 66

  Fly    69 FVGFPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKGAKIQLLDLPGIIEGAKDGKGRGR 133
            .|||||||||||||::...:||.|.|||||||.:||.|.|.||.|||||||||||||..||||||
 Worm    67 MVGFPSVGKSTLLSSMTSTHSEAAGYEFTTLTCIPGVISYNGANIQLLDLPGIIEGASQGKGRGR 131

  Fly   134 QVIAVARTCNLIFMVLDCLKPLGHKKLLEHELEGFGIRLNKKPPNIYYKRKDKGGINLNSMVPQS 198
            |||:||:|.:||.|:||..|....|.|||.|||..||||||||||||.|:|..||:...:.||.:
 Worm   132 QVISVAKTADLILMMLDAGKSDQQKMLLERELEAVGIRLNKKPPNIYVKQKKVGGVKFTNTVPLT 196

  Fly   199 ELDTDLVKTILSEYKIHNADITLRYDATSDDLIDVIEGNRIYIPCIYLLNKIDQISIEELDVIYK 263
            ..:..|:.|:|.||||.|||:..|.|.|.|:.||||:|||:|:.|:|:.||:|||||||:|.:.:
 Worm   197 HCNEKLIMTVLHEYKIFNADVIFREDCTVDEFIDVIQGNRVYMTCLYVYNKVDQISIEEIDRLAR 261

  Fly   264 IPHCVPISAHHHWNFDDLLELMWEYLRLQRIYTKPKGQLPDY--NSPVVLHNERTSIEDFCNKLH 326
            :||.|.||...:.|.|.|||.|||||.|.|:|||..|..||.  ...::|....| ||..|:.||
 Worm   262 MPHHVVISCEMNLNMDYLLEKMWEYLALVRVYTKKPGNAPDLGPEDGIILRGGAT-IEHCCHALH 325

  Fly   327 RSIAKEFKYALVWGSSVKHQPQKVGIEHVLNDEDVVQIVKK 367
            ||||.:.:||:|||:|.|..||:||:.|.|:.|||:|||||
 Worm   326 RSIAAQLRYAIVWGTSTKFSPQRVGLHHKLDHEDVIQIVKK 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
128upNP_536733.1 Rbg1 1..367 CDD:224085 216/364 (59%)
C02F5.3NP_498808.2 Rbg1 1..366 CDD:224085 216/364 (59%)
P-loop_NTPase 3..>97 CDD:304359 64/94 (68%)
DRG 63..295 CDD:206683 140/231 (61%)
TGS_DRG_C 289..365 CDD:133436 37/76 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1163
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60797
OrthoDB 1 1.010 - - D348788at33208
OrthoFinder 1 1.000 - - FOG0001080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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