DRSC/TRiP Functional Genomics Resources

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Protein Alignment pds5 and AT1G80810

DIOPT Version :10

Sequence 1:NP_610719.1 Gene:pds5 / 36286 FlyBaseID:FBgn0260012 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_001321712.1 Gene:AT1G80810 / 844420 AraportID:AT1G80810 Length:826 Species:Arabidopsis thaliana


Alignment Length:422 Identity:86/422 - (20%)
Similarity:170/422 - (40%) Gaps:98/422 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TDELIRRLKTLANVLQTMDQDDNLYQQ--YIPLALHLLDDFFMQHPSRDVQLLIACCVADVLRVY 81
            ||:|:..|....::|:.::||..|..|  .||....|:....:.||..||::.:..|:.:::|:.
plant    28 TDDLLTLLDETESLLKNVEQDQPLSMQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRIT 92

  Fly    82 APEAPYKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLAFVKSFNMCFELEDCQEIFQD 146
            |||.||.: |.:|.||:..|:....|.|....|:|:..::|:|:|.|||..:..:|| |.::...
plant    93 APETPYSD-DLMKEIFRLTIEAFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLE-CYDLILQ 155

  Fly   147 LFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILINIVEPYKSNNKFACQLTEQL 211
            :|...||.:...|...|.:....::..:|.|.:.:|.:|||.:|..:.:..::.:..:..|.|::
plant   156 MFRNFFKFIRSDHPQLVFSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKV 220

  Fly   212 LTKTGDALES-TIKMFFNRALVMDKPNTKL-SITNKIYDIIYELNRINAGLLCSVLPQLENKLLS 274
            |::....|:. .|:...:|...:|..:..: ||...:::                .|::.:.:.:
plant   221 LSRCARKLKPYIIEALKSRGTSLDMYSPVVSSICQSVFN----------------TPKVHSPVNT 269

  Fly   275 TDDAERLKATTLLSRMFSEKDSQLAKKYPNLLKIFFGRFCDITEPVRIKCVQSSMHFLLNHPSLQ 339
            .:..|:|.    |.....|..|:.:.|.|                                  .:
plant   270 KEHEEKLD----LGHSRKENLSKSSSKRP----------------------------------AR 296

  Fly   340 HD---ITEKLRLRNHDLDEVVRHEVVMAIVETAKRDFTLVLEAPDLLEIVRERTLDKKYKIRRDA 401
            |:   |.||.::||.:...:::..                      |:.||..:.|.:...:|..
plant   297 HETRGINEKEKVRNGNKSSLLKQS----------------------LKQVRSESTDAEITGKRGR 339

  Fly   402 MNGLAYIYKRAICEPNDLSTGLKVRVDWIKNK 433
                         :||.|.......:.|:..|
plant   340 -------------KPNSLMNPEDYDISWLSGK 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pds5NP_610719.1 PDS5 20..1130 CDD:466319 85/421 (20%)
AT1G80810NP_001321712.1 PDS5 31..>232 CDD:410996 55/202 (27%)
Tudor_Agenet_AtEML-like 559..609 CDD:410475
Blue background indicates that the domain is not in the aligned region.

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