DRSC/TRiP Functional Genomics Resources

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Protein Alignment pds5 and AT1G15940

DIOPT Version :9

Sequence 1:NP_001246271.1 Gene:pds5 / 36286 FlyBaseID:FBgn0260012 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_173046.2 Gene:AT1G15940 / 838164 AraportID:AT1G15940 Length:990 Species:Arabidopsis thaliana


Alignment Length:882 Identity:177/882 - (20%)
Similarity:310/882 - (35%) Gaps:282/882 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TDELIRRLKTLANVLQTMDQDDNLYQQYIPLALH-----LLDDFFMQHPSRDVQLLIACCVADVL 78
            ||..:..|:.:.::|.|::||   ....:..|||     |:....:::|..||::.:..|:.:::
plant    30 TDATLSLLEVMESLLATVEQD---LSSSVQKALHPPMRALVSADLLRNPDSDVRVSVVSCLTEIM 91

  Fly    79 RVYAPEAPYKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLAFVKSFNMCFELEDCQEI 143
            |:.||||||.: :|:|.||:..|:....|.|....|:::...:||.:|.|:|..:..:|| |.::
plant    92 RITAPEAPYND-EQMKDIFQVTIEAFEKLADASSRSYRKAEVILETVAKVRSSLVMLDLE-CDDL 154

  Fly   144 FQDLFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILINIVEPYKSNNKFACQLT 208
            ..::|....||:...|...|......::..:|.|::.:.::||:::|..:.:..:..:..|..|.
plant   155 VLEMFQRFLKIIRPDHPQLVLVSMETIMITVIDESEEVPMDLLEILLTTVKKDSQDVSPAALTLV 219

  Fly   209 EQLLTKTG--------DALESTIKMFFNRALVMDKP------NTKLSITNKIYDIIYELN----R 255
            |::|:...        :||:|:     ..:|.|..|      .::.:.|....|:..:.|    :
plant   220 EKVLSSCTCKLQPCIMEALKSS-----GTSLDMYSPVVSSICQSEFATTQAHNDVKPKDNEADEK 279

  Fly   256 INAGLLCSVLP--QLENKL----------------------------------LS-TDDAERLKA 283
            |:.|   .|:|  .||:||                                  || :.|||....
plant   280 ISEG---QVVPSDSLEDKLNLGLSRKGTRSKRSARGGTRRANGDEKVITANEGLSESTDAETASG 341

  Fly   284 TT---------LL------------SRMFSEK---DSQL----AKKYPNLLKIFFGRFCDITEPV 320
            :|         |:            |:...||   ||.|    |||.                |:
plant   342 STRKRGWKPKSLMNPEEGYSFKTSSSKKVQEKELGDSSLGKVAAKKV----------------PL 390

  Fly   321 RIKCVQSSMHFLLNHPSLQHDITEKLRLRNHDLDEVVRHEVVMAIVETAKRDFTLVLEAPDLLEI 385
            ..|..|::...:::..|.....|.. |.|:....|...|:|.....:.||:              
plant   391 PSKVGQTNQSVVISLSSSGRARTGS-RKRSRTKMEETDHDVSSVATQPAKK-------------- 440

  Fly   386 VRERTLDKKYKIRRDAMNGLAYIYKRAICEPNDLSTGLKVRVDWIKNKILHGYYKVGLEDRLLVE 450
               :|:.|....:.|       :.|..:.:..|   |:|......|.|..:|..|...: :.|.|
plant   441 ---QTVKKTNPAKED-------LTKSNVKKHED---GIKTGKSSKKEKADNGLAKTSAK-KPLAE 491

  Fly   451 RLLITCLVPYKLAPEERMKKLYHLLGDLDANATKAFVELQKN----QMKTRNTVSDWIKLHHSKE 511
            .:::          :...|||.|      ::|.|      ||    .|.|....|...|...|:.
plant   492 TMMV----------KPSGKKLVH------SDAKK------KNSEGASMDTPIPQSSKSKKKDSRA 534

  Fly   512 FTPRVLSQLSAKQANIAKLLPDPLK--AAEYLTQFSNNLRKDAQLLRCINIVLKRDVSCRECADT 574
            .||      :.|::..|......:|  |.|.:...:|.|.::....| :|:....|....|    
plant   535 TTP------ATKKSEQAPKSHPKMKRIAGEEVESNTNELGEELVGKR-VNVWWPLDKKFYE---- 588

  Fly   575 MGVL-----LKKL-------GAHVQSNLYYNTVKMLIERVASVMVDKESIGVLISLIEQCIEKGS 627
             ||:     :||:       |...:.||.....| :||..:|...|||.               .
plant   589 -GVIKSYCRVKKMHQVTYSDGDVEELNLKKERFK-IIEDKSSASEDKED---------------D 636

  Fly   628 MCEEIGISAQEAGERGLKLLAMLSYVFSAHFFTDTSLRHLISLLSYEQDYVAPLVLKTLTHLGRY 692
            :.|...:||....|:..|                   |.::|      ..|.|            
plant   637 LLESTPLSAFIQREKSKK-------------------RKIVS------KNVEP------------ 664

  Fly   693 QPLIDDPTPAILDELAPVCKDFALIGTPKQAKHAVRCIFVNSQSSASTDG--------------A 743
                 ..:|.:...:..:.|..::..:.||.|.....:...|....||.|              .
plant   665 -----SSSPEVRSSMQTMKKKDSVTDSIKQTKRTKGALKAVSNEPESTTGKNLKSLKKLNGEPDK 724

  Fly   744 TSG-AGSASTTTQTVHPIFNEIIETLRLKLTPNCEHQ 779
            |.| .|.....||.:|           .|:..:|:.|
plant   725 TRGRTGKKQKVTQAMH-----------RKIEKDCDEQ 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pds5NP_001246271.1 None
AT1G15940NP_173046.2 PTZ00121 <410..989 CDD:173412 88/473 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D69768at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12663
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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