DRSC/TRiP Functional Genomics Resources

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Protein Alignment pds5 and AT5G47690

DIOPT Version :9

Sequence 1:NP_001246271.1 Gene:pds5 / 36286 FlyBaseID:FBgn0260012 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_001119390.1 Gene:AT5G47690 / 834820 AraportID:AT5G47690 Length:1607 Species:Arabidopsis thaliana


Alignment Length:1274 Identity:284/1274 - (22%)
Similarity:519/1274 - (40%) Gaps:188/1274 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VEDLGT---------DELIRRLKTLANVLQTMDQDDNLYQQYIPLALHLLDDF--------FMQH 61
            :::||:         |.|::.||..|..|..::|...      |..|..:..|        .:.|
plant     9 LKELGSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPP------PAVLKSIQPFLDAVIKPEILNH 67

  Fly    62 PSRDVQLLIACCVADVLRVYAPEAPYKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLA 126
            ..:||:||:|.||:::.|:.||||||.: :.:|.||:..:....||.|...|||.|...:||.:|
plant    68 QDKDVKLLVASCVSEITRITAPEAPYSD-NIMKDIFQLIVSAFAGLNDVSGPSFGRRVLILETVA 131

  Fly   127 FVKSFNMCFELEDCQEIFQDLFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILI 191
            ..:|..:..:|| |.::.:::|:|...:..|.|...|.:...:::..|:.|::::...|| |||:
plant   132 KYRSCVVMLDLE-CDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMIVLLEESEDVQEHLL-LILL 194

  Fly   192 NIVEPYKSNNKFAC-QLTEQLLTKTGDALESTIKMFFNRALVMDKPNTKLSITNKIYDIIYELNR 255
            :.:...:|:.:.|. :|..:::......:||.||.|...::..|...:...|  ..:::||:|.|
plant   195 SKLGRNRSDVRDAARRLAMKVIEHCAPKVESDIKQFLISSMSGDSRFSSSQI--DYHEVIYDLYR 257

  Fly   256 INAGLLCSVLPQLENKLLSTDDAERLKATTLLSRMFSEKDSQLAKKYPNLLKIFFGRFCDITEPV 320
            .....|..|.|.|..:||:.....|||...|:..:||.....:::::.::...|..|..|....|
plant   258 CAPQALSGVAPYLTGELLADKLETRLKVVGLVGELFSLPGRVISEEFDSIFLEFLKRLTDRVVEV 322

  Fly   321 RIKCVQSSMHFLLNHP--SLQHDITEKLRLRNHDLDEVVRHEVVMAIVETAKRDFTLVLEAPDLL 383
            |:..:......||:.|  :....|...|..|..|.||.:|.:||..|.:.:....|.:  ..|.:
plant   323 RMAILDHIKDCLLSDPLRAEASQIISALCDRLLDYDENIRKQVVAVICDVSVSALTSI--PVDTM 385

  Fly   384 EIVRERTLDKKYKIRRDAMNGLAYIYKRAI--CEPNDLSTGLKVRVDWIKNKILHGYYKVGLEDR 446
            ::|.||..||...::...|..|..:::...  |....:.||   ..:||..|||...|.......
plant   386 KLVAERLRDKAILVKTYTMERLTELFRVYCLRCADGKVDTG---DFNWIPGKILRCLYDKDFRSD 447

  Fly   447 LLVERLLITCLVPYKLAPEERMKKLYHLLGDLDANATKAFVELQKNQMKTRNTVSDWIKLHHSKE 511
             .:|.:|.:.|.|...:..:::|....:....|...||||.::.:.:.:.:..:..::.:..:::
plant   448 -TIEYILCSSLFPSDFSVRDKVKHWIQIFSGFDKVETKAFEKILEQRQRIQQEMQRYLSIKQTQQ 511

  Fly   512 F--TPRVLSQLSAKQANIAKLLPDPLKAAE---YLTQFSNNLRKDAQLLRCINIVLKRDVSCREC 571
            .  .|.:..::......:::...||.|..:   .|.|.     |||.:.:.:..:|..:.|..:.
plant   512 TADAPEIQKKILFGFRVMSRAFSDPPKTEQNFLILDQL-----KDANIWKILTNLLDPNTSITQA 571

  Fly   572 ADTMGVLLKKLGAHVQSNLYYNTVKMLIERVASVMVDKESIGVLISLIEQCIEKGSMCEEIGISA 636
            :.....:||.|.   :.:..|:.:..|..:.:.::..||.:..:  |.|..:.|.|. ..:||  
plant   572 SRIRDDMLKILS---EKHSLYDFLSTLSIKCSYLLFSKEYVKEI--LAEVSVRKSSK-NTLGI-- 628

  Fly   637 QEAGERGLKLLAMLSYVFSAHFFTDTSLRHLISLLSYEQDYVAPLVLKTLTHLG---RYQPLIDD 698
                :..:..|.:|: .|....| |.:...|||.|..:.:.:....||.|...|   |...::..
plant   629 ----QPCMDFLGLLA-CFCPSLF-DGAEEELISFLKDDDEMMKEGTLKILAKAGGTIRENLIVLA 687

  Fly   699 PTPAILDELAPVCKDFALIGTPKQAKHAVRCIFVNSQSSASTDGATSGAGSASTTTQTVHPIFNE 763
            .:..:|  |..:|.:    |..||||:||..:    .|....||..|           :..::..
plant   688 SSVDLL--LERICVE----GNRKQAKYAVHAL----ASITKDDGLKS-----------LSVLYKR 731

  Fly   764 IIETLRLKLTPNCEHQRTKIVTLGHIAYNMPQAFLT---PIKNMIARRIVKELLIQEVPAQRDYE 825
            :::.|..|     .:|...:..||.||......:.|   .:...|..:|:|  |..|....:...
plant   732 LVDMLEDK-----RYQPAVLQCLGCIAQIAMPVYETRESEVVEFIRSKILK--LKSETVDDKKLS 789

  Fly   826 LPEDSDWCAQEKLPPDTLCK-----LDA-LKAMARWLLGLRTDEHAAQKTFRMLAAFVNQRGDLL 884
            ..:.|:.|..:.....||.|     .|| |:|....|||:          .:.:.:|.....||.
plant   790 WDDKSEICQLKIYGIKTLVKSYLPFKDAQLRAGVDDLLGI----------LKNILSFGEVSEDLE 844

  Fly   885 GQNRLCGAEKSWLRLGAACAMLKVCEQKGVGDQYSAEQYLQLSQLMADPVPEVREIFARKLH--- 946
            ..:    .:|:.|||.||.|:|::  .:...|:...|.:....:....|.|..::||..|:|   
plant   845 SSS----VDKAHLRLAAAKAVLRL--SRHWDDKIPIEIFHLTLKTPEIPFPTAKKIFLGKVHQYV 903

  Fly   947 KGLSRSLPRNCLPL-DFMGLYVLAGLETERKLQDLVRHYAETDVNKRREYLKTVAMTSPDSSTES 1010
            |.....:...|..| |..|..||...|.:..|.|:::|..:|.|.|            ..:.|::
plant   904 KDRVLEMKYACSFLFDITGSNVLESEEDKHNLADIIQHSYQTKVRK------------ISAQTDA 956

  Fly  1011 QSLHILPDYMLAFAIPVLVHD--PRFTNHEDYVQLRKMEKCLRFILEPLMAKRE----------- 1062
            .|:.:.|.::|.:.:..|.|.  |.....:|..:...:.:.|..|:..|:.|.|           
plant   957 NSVTLYPHHILPYLVHALAHHSCPDVEKCKDVKEYEMIYRQLYLIISMLLHKEEDGKTEDIDKER 1021

  Fly  1063 ----TFVHSFYKQLLQLIKHREFSLGSDKRDNYKMWALCDLAMYIID---SKFSPFDGNTSTFSM 1120
                |.:..|:.     ||..|....:.|..|  ..|:|:|.:.||:   .|.....|..:..|:
plant  1022 EYVPTIILIFHS-----IKQSEDVTDATKSKN--SHAICELGLSIINHLTQKEPDLQGEITPVSL 1079

  Fly  1121 PLALPEMYYKEPAVANFQNNDVYIPLDVYTLGAKSTSKAAATAMTTSR---------AAVAPKRP 1176
            |   |.:|.....|..          |...:|.:....|..|.:...|         |:|.|:..
plant  1080 P---PTLYKPSEKVEG----------DKSQVGEEKLWLADETVLLHFRALKLESHADASVIPQTS 1131

  Fly  1177 AEQSIMDDENPQE----NNLFDNIRAADTTEPMAKRTRA 1211
            ..:.::|.|:...    ..:.:.:||..|.....|:.::
plant  1132 ENEVMIDGESDGNEIPLGKIVERLRAQGTKTRKGKKNKS 1170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pds5NP_001246271.1 None
AT5G47690NP_001119390.1 Ribosomal_L24e_L24 <1510..1590 CDD:294589
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 188 1.000 Domainoid score I965
eggNOG 1 0.900 - - E1_KOG1525
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 188 1.000 Inparanoid score I1399
OMA 1 1.010 - - QHG55449
OrthoDB 1 1.010 - - D69768at2759
OrthoFinder 1 1.000 - - FOG0001888
OrthoInspector 1 1.000 - - otm2641
orthoMCL 1 0.900 - - OOG6_101478
Panther 1 1.100 - - O PTHR12663
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.840

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