DRSC/TRiP Functional Genomics Resources

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Protein Alignment pds5 and Pds5a

DIOPT Version :10

Sequence 1:NP_610719.1 Gene:pds5 / 36286 FlyBaseID:FBgn0260012 Length:1218 Species:Drosophila melanogaster
Sequence 2:XP_006504178.1 Gene:Pds5a / 71521 MGIID:1918771 Length:1333 Species:Mus musculus


Alignment Length:1237 Identity:454/1237 - (36%)
Similarity:701/1237 - (56%) Gaps:93/1237 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVYPTGCRPLVEDLGTDELIRRLKTLANVLQTMDQD-DNLYQQYIPLALHLLDDFFMQHPSRDVQ 67
            |.||.|.:.:.:.:.|||:|:|||.:......|||| ::..|||:||||||..:||:::|::||:
Mouse    22 IAYPPGVKEITDKITTDEMIKRLKMVVKTFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVR 86

  Fly    68 LLIACCVADVLRVYAPEAPYKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLAFVKSFN 132
            ||:|||:||:.|:|||||||...|::|.||.|..:||.||:|.:.|.|.||||||||||:|||:|
Mouse    87 LLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYN 151

  Fly   133 MCFELEDCQEIFQDLFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILINIVEPY 197
            :|||||||.|||..||.|:|.::|:.|:.||....||::|.:|.|.|.::.||||.||||::..:
Mouse   152 ICFELEDCNEIFIQLFRTLFSVINNSHNTKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAH 216

  Fly   198 KSNNKFACQLTEQLLTKTGDALESTIKMFFNRALVMDKPNTKLSITNKIYDIIYELNRINAGLLC 262
            |:.||.:..|.:.||.:|...:|:.|..|||:.||:.:.:.. .::..::|:|.||..|:..||.
Mouse   217 KNLNKQSFDLAKVLLKRTVQTIEACIANFFNQVLVLGRSSVS-DLSEHVFDLIQELFAIDPQLLL 280

  Fly   263 SVLPQLENKLLSTDDAERLKATTLLSRMFSEKDSQLAKKYPNLLKIFFGRFCDITEPVRIKCVQS 327
            ||:||||.||.|.|..|||....||:::|..|||.||.:...|.:.|.|||.||..|||::.|:.
Mouse   281 SVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKF 345

  Fly   328 SMHFLLNHPSLQHDITEKLRLRNHDLDEVVRHEVVMAIVETAKRDFTLVLEAPDLLEIVRERTLD 392
            :.|.|:|||.|..|:||.|::|:||.:|.:||:|::.|:..||||..||.:  .||..|||||||
Mouse   346 ASHCLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVTIITAAKRDLALVND--QLLGFVRERTLD 408

  Fly   393 KKYKIRRDAMNGLAYIYKRAICEPNDLSTGLKVRVDWIKNKILHGYYKVGLEDRLLVERLLITCL 457
            |::::|::||.|||.:||: .|...:.......:|.|||:|:||.||:..::|:||||::....|
Mouse   409 KRWRVRKEAMMGLAQLYKK-YCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYL 472

  Fly   458 VPYKLAPEERMKKLYHLLGDLDANATKAFVELQKNQMKTRNTVSDWIKLHHSKEFTPRV-LSQLS 521
            ||:.|..|||||.||:|...||.||.||..|:.|.|...|:.|.:.:.||  |:.|... .|.:.
Mouse   473 VPHNLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLH--KQPTSEANCSAMF 535

  Fly   522 AKQANIAKLLPDPLKAAEYLTQFSNNLRKDAQLLRCINIVLKRDVSCRECADTMGVLLKKLGAHV 586
            .|...|||.||||.||.:::.:|:..|..|.:|...:.:::....||::....:..:.:||....
Mouse   536 GKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANPK 600

  Fly   587 Q-SNLYYNTVKMLIERVASVMVDKESIGVLISLIEQCIEKGSMCEEIGISAQEAGERGLKLLAML 650
            | :|.:...||.|:||:|.|.:|.|:|..|:.|:.:.||..:..||.|:|...|...||:||.:|
Mouse   601 QPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRSGLELLKVL 665

  Fly   651 SYVFSAHFFTDTSLRHLISLLSYEQDYVAPLVLKTLTHLGRYQPLIDDPTPAILDELAPVCKDFA 715
            |:.....|.:..:...|:..|..|.|.||...::...:.|.   .|:...|.|...|.|:....|
Mouse   666 SFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGH---KIETDLPQIRSTLIPILHQKA 727

  Fly   716 LIGTPKQAKHAVRCIFVNSQSSASTDGATSGAGSASTTTQTVHPIFN-------EIIETLRLKLT 773
            ..|||.|||.||.||                           |.||:       :|.|.|...|.
Mouse   728 KRGTPHQAKQAVHCI---------------------------HAIFSNKEVQLAQIFEPLSRSLN 765

  Fly   774 PNCEHQR-TKIVTLGHIAYNMPQAFLTPIKNMIARRIVKELLIQE-VPAQRDYELPEDSDWCAQE 836
            .:...|. |.:|:||||:...|..|.:|:|:::|..|||:||:.: ...:::.:|     |...|
Mouse   766 ADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKL-----WSPDE 825

  Fly   837 KLPPDTLCKLDALKAMARWLLGLRTDE-HAAQKTFRMLAAFVNQRGDLLGQNRLCGAEKSWLRLG 900
            ::.|:.|.|:.|:|.:.|||||::.:: .:|..|.|:|:|.:...|||..|.|:..::.|.|||.
Mouse   826 EVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLA 890

  Fly   901 AACAMLKVCEQKGVGDQYSAEQYLQLSQLMADPVPEVREIFARKLHKGLSRSLPRNCLPLDFMGL 965
            |..|::|:.::....:..:.||:...:.::.|...:||:|||:||||.|.:.|    |||::|.:
Mouse   891 AGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLL----LPLEYMAI 951

  Fly   966 YVLAGLETERKLQDLVRHYAETDVNKRREYLKTVAMTSPDSSTESQSLHILPDYMLAFAIPVLVH 1030
            :.|...:..::.:...|.....:::.||||:|...|     :|| :.|.:||:|::.:.|.:|.|
Mouse   952 FALCAKDPVKERRAHARQCLLKNISIRREYIKQNPM-----ATE-KLLSLLPEYVVPYMIHLLAH 1010

  Fly  1031 DPRFTNHEDYVQLRKMEKCLRFILEPLMAKRETFVHSFYKQLLQLIK-HREFSLGSDKRDNYKMW 1094
            ||.||..:|..|||.:::||.|:||.||.|.|...|:|.|::.:.|| .|:.....:.:.|.|::
Mouse  1011 DPDFTRSQDVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTRDAQSPDESKTNEKLY 1075

  Fly  1095 ALCDLAMYIIDSKF------SPFDGNTSTFSMPLALPEMYYKEPAVANFQNNDVYIPLDVYTLGA 1153
            .:||:|:.:|:||.      ||.|        |: ||..::.:|. .:|.|:..||..:...|..
Mouse  1076 TVCDVALCVINSKSALCNADSPKD--------PV-LPMKFFTQPE-KDFCNDKSYISEETRVLLL 1130

  Fly  1154 KSTSKAAATAMTTSRAAVAP-KRPAEQSIMDDENPQENNLFDNIRAADTTEPMA----KRTRAGA 1213
            ....|......|.::...|. ::|..:|...:..       .||.|.....|.|    .|.::..
Mouse  1131 TGKPKPTGVLGTVNKPLSATGRKPYVRSAGTETG-------SNINANSELSPSAGSRSSREQSSE 1188

  Fly  1214 AS 1215
            ||
Mouse  1189 AS 1190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pds5NP_610719.1 PDS5 20..1130 CDD:466319 430/1129 (38%)
Pds5aXP_006504178.1 PDS5 38..1108 CDD:466319 430/1129 (38%)
HEAT repeat 282..312 CDD:293787 15/29 (52%)
HEAT repeat 322..348 CDD:293787 11/25 (44%)
HEAT repeat 359..385 CDD:293787 12/25 (48%)

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