DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pds5 and Pds5a

DIOPT Version :9

Sequence 1:NP_001246271.1 Gene:pds5 / 36286 FlyBaseID:FBgn0260012 Length:1218 Species:Drosophila melanogaster
Sequence 2:XP_006504178.1 Gene:Pds5a / 71521 MGIID:1918771 Length:1333 Species:Mus musculus


Alignment Length:1237 Identity:454/1237 - (36%)
Similarity:701/1237 - (56%) Gaps:93/1237 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVYPTGCRPLVEDLGTDELIRRLKTLANVLQTMDQD-DNLYQQYIPLALHLLDDFFMQHPSRDVQ 67
            |.||.|.:.:.:.:.|||:|:|||.:......|||| ::..|||:||||||..:||:::|::||:
Mouse    22 IAYPPGVKEITDKITTDEMIKRLKMVVKTFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVR 86

  Fly    68 LLIACCVADVLRVYAPEAPYKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLAFVKSFN 132
            ||:|||:||:.|:|||||||...|::|.||.|..:||.||:|.:.|.|.||||||||||:|||:|
Mouse    87 LLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYN 151

  Fly   133 MCFELEDCQEIFQDLFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILINIVEPY 197
            :|||||||.|||..||.|:|.::|:.|:.||....||::|.:|.|.|.::.||||.||||::..:
Mouse   152 ICFELEDCNEIFIQLFRTLFSVINNSHNTKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAH 216

  Fly   198 KSNNKFACQLTEQLLTKTGDALESTIKMFFNRALVMDKPNTKLSITNKIYDIIYELNRINAGLLC 262
            |:.||.:..|.:.||.:|...:|:.|..|||:.||:.:.:.. .::..::|:|.||..|:..||.
Mouse   217 KNLNKQSFDLAKVLLKRTVQTIEACIANFFNQVLVLGRSSVS-DLSEHVFDLIQELFAIDPQLLL 280

  Fly   263 SVLPQLENKLLSTDDAERLKATTLLSRMFSEKDSQLAKKYPNLLKIFFGRFCDITEPVRIKCVQS 327
            ||:||||.||.|.|..|||....||:::|..|||.||.:...|.:.|.|||.||..|||::.|:.
Mouse   281 SVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKF 345

  Fly   328 SMHFLLNHPSLQHDITEKLRLRNHDLDEVVRHEVVMAIVETAKRDFTLVLEAPDLLEIVRERTLD 392
            :.|.|:|||.|..|:||.|::|:||.:|.:||:|::.|:..||||..||.:  .||..|||||||
Mouse   346 ASHCLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVTIITAAKRDLALVND--QLLGFVRERTLD 408

  Fly   393 KKYKIRRDAMNGLAYIYKRAICEPNDLSTGLKVRVDWIKNKILHGYYKVGLEDRLLVERLLITCL 457
            |::::|::||.|||.:||: .|...:.......:|.|||:|:||.||:..::|:||||::....|
Mouse   409 KRWRVRKEAMMGLAQLYKK-YCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYL 472

  Fly   458 VPYKLAPEERMKKLYHLLGDLDANATKAFVELQKNQMKTRNTVSDWIKLHHSKEFTPRV-LSQLS 521
            ||:.|..|||||.||:|...||.||.||..|:.|.|...|:.|.:.:.||  |:.|... .|.:.
Mouse   473 VPHNLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLH--KQPTSEANCSAMF 535

  Fly   522 AKQANIAKLLPDPLKAAEYLTQFSNNLRKDAQLLRCINIVLKRDVSCRECADTMGVLLKKLGAHV 586
            .|...|||.||||.||.:::.:|:..|..|.:|...:.:::....||::....:..:.:||....
Mouse   536 GKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANPK 600

  Fly   587 Q-SNLYYNTVKMLIERVASVMVDKESIGVLISLIEQCIEKGSMCEEIGISAQEAGERGLKLLAML 650
            | :|.:...||.|:||:|.|.:|.|:|..|:.|:.:.||..:..||.|:|...|...||:||.:|
Mouse   601 QPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRSGLELLKVL 665

  Fly   651 SYVFSAHFFTDTSLRHLISLLSYEQDYVAPLVLKTLTHLGRYQPLIDDPTPAILDELAPVCKDFA 715
            |:.....|.:..:...|:..|..|.|.||...::...:.|.   .|:...|.|...|.|:....|
Mouse   666 SFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGH---KIETDLPQIRSTLIPILHQKA 727

  Fly   716 LIGTPKQAKHAVRCIFVNSQSSASTDGATSGAGSASTTTQTVHPIFN-------EIIETLRLKLT 773
            ..|||.|||.||.||                           |.||:       :|.|.|...|.
Mouse   728 KRGTPHQAKQAVHCI---------------------------HAIFSNKEVQLAQIFEPLSRSLN 765

  Fly   774 PNCEHQR-TKIVTLGHIAYNMPQAFLTPIKNMIARRIVKELLIQE-VPAQRDYELPEDSDWCAQE 836
            .:...|. |.:|:||||:...|..|.:|:|:::|..|||:||:.: ...:::.:|     |...|
Mouse   766 ADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKL-----WSPDE 825

  Fly   837 KLPPDTLCKLDALKAMARWLLGLRTDE-HAAQKTFRMLAAFVNQRGDLLGQNRLCGAEKSWLRLG 900
            ::.|:.|.|:.|:|.:.|||||::.:: .:|..|.|:|:|.:...|||..|.|:..::.|.|||.
Mouse   826 EVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLA 890

  Fly   901 AACAMLKVCEQKGVGDQYSAEQYLQLSQLMADPVPEVREIFARKLHKGLSRSLPRNCLPLDFMGL 965
            |..|::|:.::....:..:.||:...:.::.|...:||:|||:||||.|.:.|    |||::|.:
Mouse   891 AGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLL----LPLEYMAI 951

  Fly   966 YVLAGLETERKLQDLVRHYAETDVNKRREYLKTVAMTSPDSSTESQSLHILPDYMLAFAIPVLVH 1030
            :.|...:..::.:...|.....:::.||||:|...|     :|| :.|.:||:|::.:.|.:|.|
Mouse   952 FALCAKDPVKERRAHARQCLLKNISIRREYIKQNPM-----ATE-KLLSLLPEYVVPYMIHLLAH 1010

  Fly  1031 DPRFTNHEDYVQLRKMEKCLRFILEPLMAKRETFVHSFYKQLLQLIK-HREFSLGSDKRDNYKMW 1094
            ||.||..:|..|||.:::||.|:||.||.|.|...|:|.|::.:.|| .|:.....:.:.|.|::
Mouse  1011 DPDFTRSQDVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTRDAQSPDESKTNEKLY 1075

  Fly  1095 ALCDLAMYIIDSKF------SPFDGNTSTFSMPLALPEMYYKEPAVANFQNNDVYIPLDVYTLGA 1153
            .:||:|:.:|:||.      ||.|        |: ||..::.:|. .:|.|:..||..:...|..
Mouse  1076 TVCDVALCVINSKSALCNADSPKD--------PV-LPMKFFTQPE-KDFCNDKSYISEETRVLLL 1130

  Fly  1154 KSTSKAAATAMTTSRAAVAP-KRPAEQSIMDDENPQENNLFDNIRAADTTEPMA----KRTRAGA 1213
            ....|......|.::...|. ::|..:|...:..       .||.|.....|.|    .|.::..
Mouse  1131 TGKPKPTGVLGTVNKPLSATGRKPYVRSAGTETG-------SNINANSELSPSAGSRSSREQSSE 1188

  Fly  1214 AS 1215
            ||
Mouse  1189 AS 1190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pds5NP_001246271.1 None
Pds5aXP_006504178.1 HEAT repeat 282..312 CDD:293787 15/29 (52%)
HEAT repeat 322..348 CDD:293787 11/25 (44%)
HEAT repeat 359..385 CDD:293787 12/25 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841003
Domainoid 1 1.000 743 1.000 Domainoid score I93
eggNOG 1 0.900 - - E1_KOG1525
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 747 1.000 Inparanoid score I580
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55449
OrthoDB 1 1.010 - - D56082at33208
OrthoFinder 1 1.000 - - FOG0001888
OrthoInspector 1 1.000 - - otm42930
orthoMCL 1 0.900 - - OOG6_101478
Panther 1 1.100 - - LDO PTHR12663
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3128
SonicParanoid 1 1.000 - - X1823
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

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