DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pds5 and pds5a

DIOPT Version :9

Sequence 1:NP_001246271.1 Gene:pds5 / 36286 FlyBaseID:FBgn0260012 Length:1218 Species:Drosophila melanogaster
Sequence 2:XP_005170973.1 Gene:pds5a / 393967 ZFINID:ZDB-GENE-040426-1612 Length:1321 Species:Danio rerio


Alignment Length:1274 Identity:449/1274 - (35%)
Similarity:699/1274 - (54%) Gaps:130/1274 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVYPTGCRPLVEDLGTDELIRRLKTLANVLQTMDQD-DNLYQQYIPLALHLLDDFFMQHPSRDVQ 67
            |.||.|.:.:.:.:..||:::|||.:......|||| :...|||:.|||||..:||:::|::||:
Zfish    19 ITYPLGVKEITDKISNDEVVKRLKLVVKTYMDMDQDSEEEKQQYLALALHLASEFFLRNPNKDVR 83

  Fly    68 LLIACCVADVLRVYAPEAPYKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLAFVKSFN 132
            ||:|||:||:.|:|||||||...|::|.||.|..:||.||:|.:.|.|.||||||||||:|||:|
Zfish    84 LLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYN 148

  Fly   133 MCFELEDCQEIFQDLFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILINIVEPY 197
            :|||||||.|||..||.|:|.::|:.|:.||....||::|.:|.|.|.::.||||.||||::..:
Zfish   149 ICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDTILINLIPAH 213

  Fly   198 KSNNKFACQLTEQLLTKTGDALESTIKMFFNRALVMDKPNTKLSITNKIYDIIYELNRINAGLLC 262
            |:.||.|..|...||.:|...:|:.|..|||:.|||.|.:.. .::..::|:|.||..|:..||.
Zfish   214 KNLNKQAYDLARTLLKRTVQTIETCIASFFNQVLVMGKSSVS-DLSEHVFDLIQELFAIDPLLLV 277

  Fly   263 SVLPQLENKLLSTDDAERLKATTLLSRMFSEKDSQLAKKYPNLLKIFFGRFCDITEPVRIKCVQS 327
            ||:||||.||.|.|..|||....||:::|..|||:||.:...|.:.|.|||.||..|||::||:.
Zfish   278 SVMPQLEFKLKSNDGEERLAVVKLLAKLFGAKDSELATQNRPLWQCFLGRFNDIHVPVRLECVKF 342

  Fly   328 SMHFLLNHPSLQHDITEKLRLRNHDLDEVVRHEVVMAIVETAKRDFTLVLEAPDLLEIVRERTLD 392
            :.|.|:|||.|..|:||.|::|:||.:|.:||:|::.|:...|:|..||.:  .||..||||.||
Zfish   343 ASHCLMNHPDLAKDLTEFLKVRSHDPEEAIRHDVIVTIINAGKKDLNLVND--QLLGFVRERMLD 405

  Fly   393 KKYKIRRDAMNGLAYIYKRAICEPNDLSTGLKVRVDWIKNKILHGYYKVGLEDRLLVERLLITCL 457
            |::::|::||.|||.::|: .|..::......:::.|||:|:||.||:..::|:||||::....:
Zfish   406 KRWRVRKEAMMGLAQLFKK-YCLHHEAGKESALKISWIKDKLLHIYYQNSIDDKLLVEKIFAQYM 469

  Fly   458 VPYKLAPEERMKKLYHLLGDLDANATKAFVELQKNQMKTRNTVSDWIKLHH---SKEFTPRVLSQ 519
            ||:.|..||:||.||:|...||.||.||..|:.|.|...|..|.:.:.||.   |:..|    |.
Zfish   470 VPHSLETEEKMKCLYYLYACLDTNAVKALNEMWKCQNMLRGLVRELLDLHKLPTSEANT----SA 530

  Fly   520 LSAKQANIAKLLPDPLKAAEYLTQFSNNLRKDAQLLRCINIVLKRDVSCRECADTMGVLLKKLGA 584
            :..|...|||.||||.||.:::.:|:..|.:|.:|...:..::....||::....:..:.:||..
Zfish   531 MFGKLMTIAKNLPDPGKAQDFMKKFNQVLGEDEKLRLQLEQLISPTCSCKQAEQCVREITRKLTF 595

  Fly   585 HVQ-SNLYYNTVKMLIERVASVMVDKESIGVLISLIEQCIEKGSMCEEIGISAQEAGERGLKLLA 648
            ..| :|.:...||.|:||:|.|.:|.|:|..|:.|:.:.||..:..|:.|::...|...||:||.
Zfish   596 PKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDEDEGVTPDTAIRAGLELLK 660

  Fly   649 MLSYVFSAHFFTDTSLRHLISLLSYEQDYVAPLVLKTLTHLGRYQPLIDDPTPAILDELAPVCKD 713
            :||:.....|.:..:...|:..|..|.|.||...::...:.|:   .|:...|.|...|.|:...
Zfish   661 VLSFTHPTAFHSAETYESLLQCLKMEDDKVAEAAIQIFRNTGQ---KIETELPQIRSTLIPILHQ 722

  Fly   714 FALIGTPKQAKHAVRCIFVNSQSSASTDGATSGAGSASTTTQTVHPIFN-------EIIETLRLK 771
            .|..|||.|||.||.||                           |.||:       :|.|.|...
Zfish   723 KAKRGTPHQAKQAVHCI---------------------------HAIFHNKEVQLAQIFEPLSRS 760

  Fly   772 LTPNCEHQR-TKIVTLGHIAYNMPQAFLTPIKNMIARRIVKELLIQEVPAQRDYELPEDSDWCAQ 835
            |..:...|. |.:|:||||:...|..|.:|:|:::|..|||:||:.:    |.........|.|.
Zfish   761 LNADVPEQLITPLVSLGHISMLAPDQFASPMKSIVANFIVKDLLMND----RSVGNKNGRLWTAD 821

  Fly   836 EKLPPDTLCKLDALKAMARWLLGLRTDE-HAAQKTFRMLAAFVNQRGDLLGQNRLCGAEKSWLRL 899
            :::.|:.|.|:.|:|.:.|||||::.:: .:|..|.|:|:|.:...|||..|.::..::.|.|||
Zfish   822 DEVSPEVLAKVQAIKLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKKISKSDMSRLRL 886

  Fly   900 GAACAMLKVCEQKGVGDQYSAEQYLQLSQLMADPVPEVREIFARKLHKGLSRSLPRNCLPLDFMG 964
            .|..|:||:.::....|..:.||:.....::.|...:||:|:|:|||..|.:.|    |||::|.
Zfish   887 AAGSAILKLAQEPCYHDIITPEQFQLCGLVINDECYQVRQIYAQKLHVALVKLL----LPLEYMA 947

  Fly   965 LYVLAGLETERKLQDLVRHYAETDVNKRREYLKTVAMTSPDSSTESQSLHILPDYMLAFAIPVLV 1029
            ::.|...:..::.:...|.....:::.||||:|...|      ...:.|.:||:|::.:.|.:|.
Zfish   948 VFALCAKDPVKERRAHARQCLLKNISVRREYIKQNPM------AHEKLLSLLPEYVVPYMIHLLA 1006

  Fly  1030 HDPRFTNHEDYVQLRKMEKCLRFILEPLMAKRETFVHSFYKQLLQLIKH-REFSLGSDKRDNYKM 1093
            |||..|..:|..|||.:::||.|:||.||.|.|...|||.:::::.||. ::.....|.:.|.|:
Zfish  1007 HDPDLTKPQDLEQLRDVKECLWFMLEVLMTKNENNSHSFLRKMVENIKQTKDAQCPDDPKANEKL 1071

  Fly  1094 WALCDLAMYIIDSKF------SPFDGNTSTFSMPLALPEMYYKEPAVANFQNNDVYI-------- 1144
            :.:||:|:::|.:|.      ||.|        |: ||..:|..|. ..|.|:..|:        
Zfish  1072 YIVCDVALFVIANKSTSCHLDSPKD--------PV-LPSKFYTPPD-KEFVNDKEYLSAEAKIVL 1126

  Fly  1145 --------PLDVYTLGAKS---------------TSKAAATAMTTSRAAVAPKRPAEQSIMD--- 1183
                    |.....|||.:               ||:..:.|.|.|:    |..||.....|   
Zfish  1127 QTGKIQQPPKQTGVLGAVNKPLTVTARRPYIKTFTSETGSNASTNSQ----PSSPATNKSRDVSS 1187

  Fly  1184 -------DENPQENNLFDNIRAADTTEPMAKRTRAGAAS 1215
                   :|||...... :::..:..:| :.|.||..||
Zfish  1188 EVGARENEENPVITKAV-SVKKEEAAQP-SGRKRAAPAS 1224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pds5NP_001246271.1 None
pds5aXP_005170973.1 HEAT repeat 279..309 CDD:293787 15/29 (52%)
HEAT repeat 319..345 CDD:293787 12/25 (48%)
HEAT repeat 356..382 CDD:293787 12/25 (48%)
Neuromodulin 1221..>1318 CDD:284117 2/4 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585502
Domainoid 1 1.000 747 1.000 Domainoid score I94
eggNOG 1 0.900 - - E1_KOG1525
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 746 1.000 Inparanoid score I558
OMA 1 1.010 - - QHG55449
OrthoDB 1 1.010 - - D56082at33208
OrthoFinder 1 1.000 - - FOG0001888
OrthoInspector 1 1.000 - - otm25747
orthoMCL 1 0.900 - - OOG6_101478
Panther 1 1.100 - - LDO PTHR12663
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3128
SonicParanoid 1 1.000 - - X1823
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

Return to query results.
Submit another query.