| Sequence 1: | NP_001246271.1 | Gene: | pds5 / 36286 | FlyBaseID: | FBgn0260012 | Length: | 1218 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001095853.1 | Gene: | Pds5b / 304218 | RGDID: | 1310838 | Length: | 1450 | Species: | Rattus norvegicus |
| Alignment Length: | 1226 | Identity: | 446/1226 - (36%) |
|---|---|---|---|
| Similarity: | 705/1226 - (57%) | Gaps: | 76/1226 - (6%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4 IVYPTGCRPLVEDLGTDELIRRLKTLANVLQTMDQDDNLYQQ-YIPLALHLLDDFFMQHPSRDVQ 67
Fly 68 LLIACCVADVLRVYAPEAPYKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLAFVKSFN 132
Fly 133 MCFELEDCQEIFQDLFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILINIVEPY 197
Fly 198 KSNNKFACQLTEQLLTKTGDALESTIKMFFNRALVMDKPNTKLS-ITNKIYDIIYELNRINAGLL 261
Fly 262 CSVLPQLENKLLSTDDAERLKATTLLSRMFSEKDSQLAKKYPNLLKIFFGRFCDITEPVRIKCVQ 326
Fly 327 SSMHFLLNHPSLQHDITEKLRLRNHDLDEVVRHEVVMAIVETAKRDFTLVLEAPDLLEIVRERTL 391
Fly 392 DKKYKIRRDAMNGLAYIYKRAICEPNDLSTGLKVRVDWIKNKILHGYYKVGLEDRLLVERLLITC 456
Fly 457 LVPYKLAPEERMKKLYHLLGDLDANATKAFVELQKNQMKTRNTVSDWIKLHHSKEFTPRVLSQLS 521
Fly 522 AKQANIAKLLPDPLKAAEYLTQFSNNLRKDAQLLRCINIVLKRDVSCRECADTMGVLLKKLGAHV 586
Fly 587 Q-SNLYYNTVKMLIERVASVMVDKESIGVLISLIEQCIEKGSMCEEIGISAQEAGERGLKLLAML 650
Fly 651 SYVFSAHFFTDTSLRHLISLLSYEQDYVAPLVLKTLTHLGRYQPLIDDPTPAILDELAPVCKDFA 715
Fly 716 LIGTPKQAKHAVRCIFVNSQSSASTDGATSGAGSASTTTQTVHPIFNEIIETLRLKLTP-NCEHQ 779
Fly 780 RTKIVTLGHIAYNMPQAFLTPIKNMIARRIVKELLIQE-VPAQRDYELPEDSDWCAQEKLPPDTL 843
Fly 844 CKLDALKAMARWLLGLRTD-EHAAQKTFRMLAAFVNQRGDLLGQNRLCGAEKSWLRLGAACAMLK 907
Fly 908 VCEQKGVGDQYSAEQYLQLSQLMADPVPEVREIFARKLHKGLSRSLPRNCLPLDFMGLYVLAGLE 972
Fly 973 TERKLQDLVRHYAETDVNKRREYLKTVAMTSPDSSTESQSLHILPDYMLAFAIPVLVHDPRFTNH 1037
Fly 1038 EDYVQLRKMEKCLRFILEPLMAKRETFVHSFYKQLLQLIKHREFSLG-SDKRDNYKMWALCDLAM 1101
Fly 1102 YIIDSKFSPFDGNTSTFSM-----PLALPEMYYKEPAVANFQNNDVYIPLDV---YTLGAKSTSK 1158
Fly 1159 AAATAMTTSRAAVAPKRPAEQSIMD-------DENPQENNLFDNIRAADTTEPMAK 1207 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| pds5 | NP_001246271.1 | None | |||
| Pds5b | NP_001095853.1 | HEAT repeat | 240..261 | CDD:293787 | 6/22 (27%) |
| HEAT repeat | 273..303 | CDD:293787 | 17/29 (59%) | ||
| HEAT repeat | 313..339 | CDD:293787 | 10/25 (40%) | ||
| HEAT repeat | 350..376 | CDD:293787 | 12/25 (48%) | ||
| HEAT. /evidence=ECO:0000255 | 383..419 | 21/37 (57%) | |||
| TFIIF_alpha | <1211..1421 | CDD:253391 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166344423 | |
| Domainoid | 1 | 1.000 | 739 | 1.000 | Domainoid score | I92 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG1525 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H41001 | |
| Inparanoid | 1 | 1.050 | 745 | 1.000 | Inparanoid score | I554 |
| OMA | 1 | 1.010 | - | - | QHG55449 | |
| OrthoDB | 1 | 1.010 | - | - | D56082at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001888 | |
| OrthoInspector | 1 | 1.000 | - | - | otm44999 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101478 | |
| Panther | 1 | 1.100 | - | - | O | PTHR12663 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X1823 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 15 | 14.770 | |||||