DRSC/TRiP Functional Genomics Resources

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Protein Alignment pds5 and Pds5b

DIOPT Version :9

Sequence 1:NP_001246271.1 Gene:pds5 / 36286 FlyBaseID:FBgn0260012 Length:1218 Species:Drosophila melanogaster
Sequence 2:XP_006504964.1 Gene:Pds5b / 100710 MGIID:2140945 Length:1449 Species:Mus musculus


Alignment Length:1190 Identity:443/1190 - (37%)
Similarity:693/1190 - (58%) Gaps:79/1190 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVYPTGCRPLVEDLGTDELIRRLKTLANVLQTMDQDDNLYQQ-YIPLALHLLDDFFMQHPSRDVQ 67
            |.||.|.:.:.:.:..:|::||||.:......||||....:: |:.|||||..|||::||.:||:
Mouse    13 ITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLALHLASDFFLKHPDKDVR 77

  Fly    68 LLIACCVADVLRVYAPEAPYKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLAFVKSFN 132
            ||:|||:||:.|:|||||||...|::|.||.|..:||.||:|.:.|.|.||||||||:|:|||:|
Mouse    78 LLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYN 142

  Fly   133 MCFELEDCQEIFQDLFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILINIVEPY 197
            :||||||..|||..|:.|:|.::|:.|:.||....:|::|.:|.|.|.:|.||||.:|:|:|..:
Mouse   143 ICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIICEGDTVSQELLDTVLVNLVPAH 207

  Fly   198 KSNNKFACQLTEQLLTKTGDALESTIKMFFNRALVMDKPNTKLS-ITNKIYDIIYELNRINAGLL 261
            |:.||.|..|.:.||.:|..|:|..|..|||:.|::.|  |.:| ::..::|:|.||..|::.||
Mouse   208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGK--TSISDLSEHVFDLILELYNIDSHLL 270

  Fly   262 CSVLPQLENKLLSTDDAERLKATTLLSRMFSEKDSQLAKKYPNLLKIFFGRFCDITEPVRIKCVQ 326
            .|||||||.||.|.|:.|||:...||::||..|||:||.:...|.:.:.|||.||..|:|::||:
Mouse   271 LSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVK 335

  Fly   327 SSMHFLLNHPSLQHDITEKLRLRNHDLDEVVRHEVVMAIVETAKRDFTLVLEAPDLLEIVRERTL 391
            .:.|.|:|||.|..|:||.|::|:||.:|.:||:|:::||..||:|..||.:  .||..||||||
Mouse   336 FASHCLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVSIVTAAKKDILLVND--HLLNFVRERTL 398

  Fly   392 DKKYKIRRDAMNGLAYIYKRAICEPNDLSTGLKVRVDWIKNKILHGYYKVGLEDRLLVERLLITC 456
            ||::::|::||.|||.|||:...:........| ::.|:|:|:||.||:..::|||||||:....
Mouse   399 DKRWRVRKEAMMGLAQIYKKYSLQSAAGKDAAK-QISWVKDKLLHIYYQNSIDDRLLVERIFAQY 462

  Fly   457 LVPYKLAPEERMKKLYHLLGDLDANATKAFVELQKNQMKTRNTVSDWIKLHHSKEFTPRVLSQLS 521
            :||:.|...||||.||:|...||.||.||..|:.|.|...|:.|.|.:.|....: |...:..:.
Mouse   463 MVPHNLETTERMKCLYYLYATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPK-TDASVKAIF 526

  Fly   522 AKQANIAKLLPDPLKAAEYLTQFSNNLRKDAQLLRCINIVLKRDVSCRECADTMGVLLKKLGAHV 586
            :|...|.:.||||.||.:::.:|:..|..|.::.:.:..::....||::....:..:.||||...
Mouse   527 SKVMVITRNLPDPGKAQDFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITKKLGNPK 591

  Fly   587 Q-SNLYYNTVKMLIERVASVMVDKESIGVLISLIEQCIEKGSMCEEIGISAQEAGERGLKLLAML 650
            | :|.:...:|.|:||:|.|.:|.|||..||..:.:.|:..:..|:.|:...:|...||:||.:|
Mouse   592 QPTNPFLEMIKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVL 656

  Fly   651 SYVFSAHFFTDTSLRHLISLLSYEQDYVAPLVLKTLTHLGRYQPLIDDPTPAILDELAPVCKDFA 715
            |:.....|.:..:...|::.|..:.:.||...|:...:.|   ..|::..|.|...|.||....:
Mouse   657 SFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTG---SKIEEDFPHIRSALLPVLHHKS 718

  Fly   716 LIGTPKQAKHAVRCIFVNSQSSASTDGATSGAGSASTTTQTVHPIFNEIIETLRLKLTP-NCEHQ 779
            ..|.|:|||:|:.||.               |..:|..||     |.:|.|.|...|.| |.||.
Mouse   719 KKGPPRQAKYAIHCIH---------------AIFSSKETQ-----FAQIFEPLHKSLDPSNLEHL 763

  Fly   780 RTKIVTLGHIAYNMPQAFLTPIKNMIARRIVKELLIQE-VPAQRDYELPEDSDWCAQEKLPPDTL 843
            .|.:||:||||...|..|..|:|:::|..|||:||:.: :|.::..:|     |...|::.|:|:
Mouse   764 ITPLVTIGHIALLAPDQFAAPLKSLVATFIVKDLLMNDRLPGKKTTKL-----WVPDEEVSPETM 823

  Fly   844 CKLDALKAMARWLLGLRTD-EHAAQKTFRMLAAFVNQRGDLLGQNRLCGAEKSWLRLGAACAMLK 907
            .|:.|:|.|.|||||::.: ..:...|.|:|...::..|||..|.::...:.|.|||.|..|::|
Mouse   824 VKIQAIKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVK 888

  Fly   908 VCEQKGVGDQYSAEQYLQLSQLMADPVPEVREIFARKLHKGLSRSLPRNCLPLDFMGLYVLAGLE 972
            :.::....:..:.|||...:..:.|...:||::||:||||||||..    |||::|.:..|...:
Mouse   889 LAQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSRLR----LPLEYMAICALCAKD 949

  Fly   973 TERKLQDLVRHYAETDVNKRREYLKTVAMTSPDSSTESQSLHILPDYMLAFAIPVLVHDPRFTNH 1037
            ..::.:...|.....::..||||||..|..|      .:.|.:||:|::.:.|.:|.|||.:...
Mouse   950 PVKERRAHARQCLVKNITVRREYLKQHAAVS------EKLLSLLPEYVVPYTIHLLAHDPDYVKV 1008

  Fly  1038 EDYVQLRKMEKCLRFILEPLMAKRETFVHSFYKQLLQLIKHREFSLG-SDKRDNYKMWALCDLAM 1101
            :|..||:.:::||.|:||.||||.|...|:|.:::::.||..:.:.| .|.:.|.|::.:||:||
Mouse  1009 QDIEQLKDVKECLWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDTKMNEKLYTVCDVAM 1073

  Fly  1102 YIIDSKFSPFDGNTSTFSM-----PLALPEMYYKEPAVANFQNNDVYIPLDVYT----------- 1150
            .||.||       ::|:|:     |: ||..::.:|. .||.|...|:|.::.:           
Mouse  1074 NIIMSK-------STTYSLESPKDPV-LPARFFTQPD-KNFSNTKNYLPPEMKSFFTPGKPKTAN 1129

  Fly  1151 -LGA--KSTSKAAATAMTTS 1167
             |||  |..|.|...:.|.|
Mouse  1130 VLGAVNKPLSSAGKQSQTKS 1149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pds5NP_001246271.1 None
Pds5bXP_006504964.1 HEAT repeat 240..261 CDD:293787 6/22 (27%)
HEAT repeat 273..303 CDD:293787 17/29 (59%)
HEAT repeat 313..339 CDD:293787 10/25 (40%)
HEAT repeat 350..376 CDD:293787 12/25 (48%)
DMP1 <1175..1433 CDD:369294
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841004
Domainoid 1 1.000 743 1.000 Domainoid score I93
eggNOG 1 0.900 - - E1_KOG1525
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41001
Inparanoid 1 1.050 747 1.000 Inparanoid score I580
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55449
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001888
OrthoInspector 1 1.000 - - otm42930
orthoMCL 1 0.900 - - OOG6_101478
Panther 1 1.100 - - O PTHR12663
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3128
SonicParanoid 1 1.000 - - X1823
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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