DRSC/TRiP Functional Genomics Resources

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Protein Alignment pds5 and pds5b

DIOPT Version :9

Sequence 1:NP_001246271.1 Gene:pds5 / 36286 FlyBaseID:FBgn0260012 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_001107500.1 Gene:pds5b / 100135353 XenbaseID:XB-GENE-6041340 Length:1449 Species:Xenopus tropicalis


Alignment Length:1182 Identity:440/1182 - (37%)
Similarity:692/1182 - (58%) Gaps:69/1182 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVYPTGCRPLVEDLGTDELIRRLKTLANVLQTMDQD-DNLYQQYIPLALHLLDDFFMQHPSRDVQ 67
            |.||.|.:.:.:.:..:|::||||.:......|||| :...:.|:.|||||..|||::||.:||:
 Frog    13 ITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKEHYLNLALHLASDFFLKHPDKDVR 77

  Fly    68 LLIACCVADVLRVYAPEAPYKEQDQIKTIFKFFIKQLHGLKDPRDPSFKRYFYLLENLAFVKSFN 132
            ||:|||:||:.|:|||||||...:::|.||.|..:||.||:|.:.|.|.||||||||:|:|||:|
 Frog    78 LLVACCLADIFRIYAPEAPYTSPEKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYN 142

  Fly   133 MCFELEDCQEIFQDLFSTIFKIVNDQHSVKVTNFFLDVLSPLITEADNLSVELLDLILINIVEPY 197
            :||||||..|||..|:.|:|.::|:.|:.||....:|::|.::.|.|.:|.||||.:|:|:|..:
 Frog   143 ICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIVCEGDTVSQELLDSVLVNLVPAH 207

  Fly   198 KSNNKFACQLTEQLLTKTGDALESTIKMFFNRALVMDKPNTKLS-ITNKIYDIIYELNRINAGLL 261
            |:.||.|..|.:.||.:|..|:|..|..|||:.|::.|  |.:| ::..::|:|.||..|::.||
 Frog   208 KNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGK--TSISDLSEHVFDLILELYNIDSHLL 270

  Fly   262 CSVLPQLENKLLSTDDAERLKATTLLSRMFSEKDSQLAKKYPNLLKIFFGRFCDITEPVRIKCVQ 326
            .|||||||.||.|.|:.|||:...||::||..|||:||.:...|.:.:.|||.||..|:|::||:
 Frog   271 LSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVK 335

  Fly   327 SSMHFLLNHPSLQHDITEKLRLRNHDLDEVVRHEVVMAIVETAKRDFTLVLEAPDLLEIVRERTL 391
            .:.|.|:|||.|..|:||.|::|:||.:|.:||:|:::||..||:|..||.:  .||..||||||
 Frog   336 FASHSLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVSIVTAAKKDLLLVND--QLLNFVRERTL 398

  Fly   392 DKKYKIRRDAMNGLAYIYKRAICEPNDLSTGLKVRVDWIKNKILHGYYKVGLEDRLLVERLLITC 456
            ||::::|::||.|||.|||:...:........| ::.|||:|:||.||:..::|||||||:....
 Frog   399 DKRWRVRKEAMMGLAQIYKKYSLQGEAGKESAK-QISWIKDKLLHIYYQNSIDDRLLVERIFAQY 462

  Fly   457 LVPYKLAPEERMKKLYHLLGDLDANATKAFVELQKNQMKTRNTVSDWIKLHHSKEFTPRVLSQLS 521
            :||:.|...||||.||:|...||.||.||..|:.|.|...|:.|.|.:.| ..|..|......:.
 Frog   463 MVPHNLETTERMKCLYYLYATLDTNAVKALNEMWKCQNMLRHHVKDLLDL-IQKPKTEAGSKAIF 526

  Fly   522 AKQANIAKLLPDPLKAAEYLTQFSNNLRKDAQLLRCINIVLKRDVSCRECADTMGVLLKKLGAHV 586
            :|...|.:.||||.|..::|.:|:..|..|.::...:..::....||:|....:..:.||||...
 Frog   527 SKVMVITRNLPDPGKGQDFLKKFTQVLEDDEKIRGQLEKLVSPTCSCKEAEVCVRDITKKLGNPK 591

  Fly   587 Q-SNLYYNTVKMLIERVASVMVDKESIGVLISLIEQCIEKGSMCEEIGISAQEAGERGLKLLAML 650
            | :|.:...:|.|:||:|.|.:|.|||..||.|:.:.|:..:..|:.|:...:|...||:||.:|
 Frog   592 QPTNPFLEMIKFLLERIAPVHIDTESISSLIKLVNKSIDGTADDEDEGVPTDQAIRAGLELLKVL 656

  Fly   651 SYVFSAHFFTDTSLRHLISLLSYEQDYVAPLVLKTLTHLGRYQPLIDDPTPAILDELAPVCKDFA 715
            |:.....|.:..:...|::.|..:.:.||...|:...:.|   ..|::..|.|...|.||.:..|
 Frog   657 SFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTG---GKIEEDFPHIRSALLPVLQQKA 718

  Fly   716 LIGTPKQAKHAVRCIFVNSQSSASTDGATSGAGSASTTTQTVHPIFNEIIETLRLKLTP-NCEHQ 779
            ..|..:|||:::.||.               |..:|..||     |.:|.|.|...|.| |.|..
 Frog   719 KKGPSRQAKYSIHCIH---------------AIFSSKETQ-----FAQIFEPLHKSLDPGNPEQL 763

  Fly   780 RTKIVTLGHIAYNMPQAFLTPIKNMIARRIVKELLIQE-VPAQRDYELPEDSDWCAQEKLPPDTL 843
            .|.:|::||||...|..|..|:|:|:|..:||:||:.: :|.::..:|     |.:.:::..:|:
 Frog   764 ITSLVSIGHIAQLAPDQFTAPLKSMVATFVVKDLLMTDRLPGKKTTKL-----WVSDDEVSAETM 823

  Fly   844 CKLDALKAMARWLLGLRTD-EHAAQKTFRMLAAFVNQRGDLLGQNRLCGAEKSWLRLGAACAMLK 907
            .|:.|:|.|.|||||::.: ..:...|.|:|.|.::..|||....:|...:.|.|||.|:||::|
 Frog   824 VKIQAIKMMVRWLLGMKNNLSKSGNSTLRLLTAILHTDGDLTEHGKLSKPDMSRLRLAASCAIVK 888

  Fly   908 VCEQKGVGDQYSAEQYLQLSQLMADPVPEVREIFARKLHKGLSRSLPRNCLPLDFMGLYVLAGLE 972
            :.::....:..:.:||...:..:.|...:||:|||:||||||||..    |||::|.:..|...:
 Frog   889 LAQEPCYHEIITLDQYQLCALAINDECYQVRQIFAQKLHKGLSRLR----LPLEYMAICALCAKD 949

  Fly   973 TERKLQDLVRHYAETDVNKRREYLKTVAMTSPDSSTESQSLHILPDYMLAFAIPVLVHDPRFTNH 1037
            ..::.:...|.....::|.||||||..|..|      .:...:||:|::.:.:.:|.|||.:...
 Frog   950 PVKERRAHARQCLVKNINVRREYLKQHAAVS------EKLFSLLPEYVVPYTVHLLAHDPDYVKV 1008

  Fly  1038 EDYVQLRKMEKCLRFILEPLMAKRETFVHSFYKQLLQLIKH-REFSLGSDKRDNYKMWALCDLAM 1101
            :|..||:.:::||.|:||.||:|.|...|:|.:::::.||. ::.....|::.|.||:.:||:||
 Frog  1009 QDIEQLKDIKECLWFVLEILMSKNENNSHAFIRKMVEYIKQTKDAQNPEDQKMNEKMYTVCDVAM 1073

  Fly  1102 YIIDSKFSPFDGNTSTFSM-----PLALPEMYYKEPAVANFQNNDVYIPLDV---YTLG-AKSTS 1157
            .||.||       ::|:|:     |: ||..::.:|. .||.|...|:|.::   :|.| .|||:
 Frog  1074 NIIISK-------STTYSLESPKDPV-LPARFFTQPD-KNFSNTKNYLPAELKSFFTPGKPKSTN 1129

  Fly  1158 KAAATAMTTSRA 1169
            ...|.....|.|
 Frog  1130 VLGAVNKPLSSA 1141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pds5NP_001246271.1 None
pds5bNP_001107500.1 HEAT repeat 240..261 CDD:293787 6/22 (27%)
HEAT repeat 273..303 CDD:293787 17/29 (59%)
HEAT repeat 313..341 CDD:293787 11/27 (41%)
HEAT repeat 350..376 CDD:293787 12/25 (48%)
Treacle 1176..>1448 CDD:367557
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 737 1.000 Domainoid score I108
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H41001
Inparanoid 1 1.050 738 1.000 Inparanoid score I601
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56082at33208
OrthoFinder 1 1.000 - - FOG0001888
OrthoInspector 1 1.000 - - otm48056
Panther 1 1.100 - - O PTHR12663
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1823
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
99.160

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