DRSC/TRiP Functional Genomics Resources

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Protein Alignment otk2 and hmcn2

DIOPT Version :9

Sequence 1:NP_612571.1 Gene:otk2 / 36284 FlyBaseID:FBgn0267728 Length:433 Species:Drosophila melanogaster
Sequence 2:XP_001920501.5 Gene:hmcn2 / 565032 ZFINID:ZDB-GENE-030131-9765 Length:4212 Species:Danio rerio


Alignment Length:338 Identity:93/338 - (27%)
Similarity:145/338 - (42%) Gaps:60/338 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 STTSEP--------QLETMLRED-----SRVALSKDSG--------ALQFTSVLASDAGQYQCQL 133
            :.||.|        |::..:|.:     :..||...||        :|:.:.|.:.|||.|||:.
Zfish   524 NVTSSPGTVAVLSCQIQGSVRHNLTWYRTGSALPSRSGRVRVLANSSLEISWVRSQDAGPYQCRA 588

  Fly   134 VIDDSVAASSSSGV--LLVIEQLKFVPQPTSKNLELGTLSKVHCKAQGTPAPQVKWMRETQLPLP 196
                |.|...|..|  |:|:|....|..|.:::..||....:.|.|.|:|.|:|.|...      
Zfish   589 ----SNAHGESQAVVWLVVLEAPSVVVSPQTQSFSLGAEVHISCSASGSPPPKVFWSHG------ 643

  Fly   197 VNV---------TDQNGTLIFNQVSNEQRGQYTCIASNSQGQITATVSINVVVAPKFSVPPEGPI 252
             |:         ..::|.|.....:.|..|.|||:|:|..|..:.:|::|....|..||..: .:
Zfish   644 -NIFLSNHHRMSISESGMLTIRGAAPEDSGNYTCLATNEVGTASQSVNVNYAEPPSISVVQQ-MV 706

  Fly   253 EVAEAGTAVIHCQAIGEPKPTIQWDK-DLTYLNENNTDPERFSLMENGTLEIRNVRPEDEGRYGC 316
            .|.....|.:.|||.|.|.|.::|.| ||    :..|.|.....:..|||:||.|:..|.|.|.|
Zfish   707 MVVAGEDASLECQASGTPSPIVKWQKGDL----DLGTAPFAEQDVHRGTLQIRGVQELDSGDYTC 767

  Fly   317 TIGSSAGLKREDVLLVLKSSKSASNSIV--TRII---IVIICLA------FLYFVLVLGLKVWYR 370
            ...:.||.....|:|.:.::.:.|.|.|  |..:   |.:.|:|      .|.:....|..::.:
Zfish   768 VASNIAGSSSAVVVLQVGAAPTFSESPVDITASVGDNITLPCIARGFPTPSLIWRRQDGRPIFGK 832

  Fly   371 YRRHLGKVQLEDG 383
            ...|:|..||..|
Zfish   833 SSGHVGTSQLPSG 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otk2NP_612571.1 IG_like 41..132 CDD:214653 16/62 (26%)
I-set 155..238 CDD:254352 23/91 (25%)
IGc2 175..228 CDD:197706 17/61 (28%)
IG_like 250..331 CDD:214653 27/81 (33%)
IGc2 258..323 CDD:197706 23/65 (35%)
hmcn2XP_001920501.5 VWA_2 38..208 CDD:290253
IG 441..512 CDD:214652
Ig 441..502 CDD:299845
I-set 516..603 CDD:254352 22/82 (27%)
Ig 533..600 CDD:143165 18/70 (26%)
IG 613..691 CDD:214652 22/84 (26%)
Ig 624..690 CDD:143165 18/72 (25%)
IG 710..784 CDD:214652 27/77 (35%)
Ig 714..781 CDD:143165 25/70 (36%)
IG 794..879 CDD:214652 12/52 (23%)
Ig 794..879 CDD:299845 12/52 (23%)
I-set 885..972 CDD:254352
Ig 904..972 CDD:299845
IG_like 982..1063 CDD:214653
IGc2 989..1053 CDD:197706
IG_like 1083..1159 CDD:214653
Ig 1089..1156 CDD:143165
I-set 1163..1241 CDD:254352
IGc2 1176..1231 CDD:197706
Ig 1244..1327 CDD:299845
IG_like 1258..1335 CDD:214653
Ig 1338..1430 CDD:299845
I-set 1344..1428 CDD:254352
IG_like 1441..1523 CDD:214653
IGc2 1448..1513 CDD:197706
IG_like 1536..1616 CDD:214653
IGc2 1545..1606 CDD:197706
IG_like 1638..1714 CDD:214653
Ig 1644..1711 CDD:143165
IG_like 1753..1830 CDD:214653
Ig 1760..1822 CDD:143165
I-set 1834..1918 CDD:254352
Ig 1851..1925 CDD:299845
IG_like 1937..2017 CDD:214653
IGc2 1943..2007 CDD:197706
IG_like 2031..2110 CDD:214653
IGc2 2039..2100 CDD:197706
I-set 2114..2202 CDD:254352
IGc2 2129..2192 CDD:197706
IG 2214..2295 CDD:214652
IGc2 2222..2287 CDD:197706
I-set 2307..2391 CDD:254352
IGc2 2321..2381 CDD:197706
I-set 2400..2484 CDD:254352
IGc2 2410..2474 CDD:197706
IG_like 2496..2576 CDD:214653
IGc2 2507..2566 CDD:197706
IG 2589..2669 CDD:214652
IGc2 2597..2659 CDD:197706
IG 2679..2760 CDD:214652
IGc2 2687..2750 CDD:197706
I-set 2764..2851 CDD:254352
Ig 2770..2845 CDD:299845
IG 2863..2943 CDD:214652
Ig 2873..2942 CDD:299845
IG_like 2954..3032 CDD:214653
IGc2 2963..3023 CDD:197706
IG_like 3046..3122 CDD:214653
IGc2 3051..3113 CDD:197706
IG_like 3133..3214 CDD:214653
Ig 3144..3213 CDD:299845
IG 3224..3303 CDD:214652
IGc2 3232..3293 CDD:197706
IG_like 3316..3394 CDD:214653
IGc2 3321..3384 CDD:197706
TSP1 3401..3452 CDD:214559
G2F 3455..3636 CDD:284812
EGF_CA 3691..3721 CDD:214542
Furin-like 3728..3857 CDD:279142
EGF_CA 3731..3774 CDD:284955
EGF_CA 3776..3814 CDD:214542
EGF_CA 3816..3849 CDD:238011
EGF_CA 3858..3899 CDD:284955
EGF_CA 3901..3940 CDD:214542
EGF_CA 4005..4044 CDD:214542
EGF_CA 4045..4085 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4475
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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