DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otk2 and Obscn

DIOPT Version :9

Sequence 1:NP_612571.1 Gene:otk2 / 36284 FlyBaseID:FBgn0267728 Length:433 Species:Drosophila melanogaster
Sequence 2:NP_001164983.2 Gene:Obscn / 380698 MGIID:2681862 Length:8032 Species:Mus musculus


Alignment Length:478 Identity:99/478 - (20%)
Similarity:168/478 - (35%) Gaps:180/478 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GRRRLLGCGLGFFCLIFCSYAAPASFEDVSISRGPKS---------------------SITIKEQ 48
            |....|.|.|        |.|||.:::     :|||:                     .:|:.:.
Mouse  3620 GTTATLSCEL--------SKAAPVTWK-----KGPKTLQSGDKYVLRQDGAVCGLQIHGLTMADA 3671

  Fly    49 SSLQLPCDYQ----------LPDGYLQK---------SSVILR----------WRKDSKTLRQ-- 82
            ......|..:          ||..:::.         ::.|||          |||.|:||:.  
Mouse  3672 GEYSCVCGQEKTSATLTVRGLPAKFIEDLRSQEATEGATAILRCELSKAAPVEWRKGSETLKDGD 3736

  Fly    83 --------------------VELGRMDS------------TTSEPQLETM--------------- 100
                                |:.|...|            ..:|..:.|:               
Mouse  3737 RYTLRQDGAVCELQIRGLAVVDTGTYSSLPTKFTEGLRNEEATEGTMATLRCQMSKAAPVEWRKG 3801

  Fly   101 ---LREDSRVALSKDSGA---LQFTSVLASDAGQYQCQLVIDDSVAASSSSGVLLVIEQL--KFV 157
               ||:..|.:|.:| ||   ||...:...|:|:|.|       |.....:...|.::.|  :|:
Mouse  3802 SETLRDGDRYSLRQD-GAMCELQIRGLTIEDSGEYTC-------VCGQEKTSATLSVKALPPRFI 3858

  Fly   158 PQPTSKNLELGTLSKVHCKAQGTPAPQVKWMRETQLPLPVNVTD-------QNGTLIFNQVSN-- 213
            ....|:....||::.:.|  |.:.|..|:|.:.::     .:.|       |||.:...|:.:  
Mouse  3859 EDLRSQEATEGTMATLRC--QMSKAAPVEWRKGSE-----TLGDGGRYSLRQNGAVCELQIHDLA 3916

  Fly   214 -EQRGQYTCIASNSQGQITATVSINVVVAPKFSVPPEGPIEVAEAGTAVIHCQAIGEPKPTIQWD 277
             |..|:|:|:.    ||...:.::||...|...:......|..|...|.:.|| :.:..| ::|.
Mouse  3917 VEDTGEYSCVC----GQEKTSATLNVKALPPRFIEDLRSQEATEGTMATLRCQ-MSKAAP-VEWR 3975

  Fly   278 KDLTYLNENNTDPERFSLMENGT---LEIRNVRPEDEGRYGCTIGS----------------SAG 323
            |.    :|...|..|:||.::|.   |:|.::..||.|:|.|..|.                :.|
Mouse  3976 KG----SETLRDGGRYSLRQDGAVCELQIHDLDVEDAGQYSCVCGQEKTSAVLTVDALPPKFTEG 4036

  Fly   324 LKRED------VLLVLKSSKSAS 340
            ||:|:      |.|..:.||.|:
Mouse  4037 LKKEEATEGTMVTLRCQMSKEAT 4059

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otk2NP_612571.1 IG_like 41..132 CDD:214653 30/195 (15%)
I-set 155..238 CDD:254352 20/92 (22%)
IGc2 175..228 CDD:197706 14/62 (23%)
IG_like 250..331 CDD:214653 27/105 (26%)
IGc2 258..323 CDD:197706 20/83 (24%)
ObscnNP_001164983.2 I-set 3855..3938 CDD:254352 20/93 (22%)
IGc2 3868..3926 CDD:197706 15/64 (23%)
I-set 3943..4026 CDD:254352 22/88 (25%)
Ig_2 3951..4021 CDD:290606 22/75 (29%)
I-set 4031..4114 CDD:254352 9/29 (31%)
IGc2 4044..4102 CDD:197706 5/16 (31%)
I-set 4119..4202 CDD:254352
I-set 4208..4291 CDD:254352
ig 4211..4279 CDD:278476
I-set 4297..4380 CDD:254352
Ig 4313..4381 CDD:143165
I-set 4385..4471 CDD:254352
Ig 4399..4464 CDD:299845
I-set 4478..4563 CDD:254352
Ig 4490..4547 CDD:299845
I-set 4566..4654 CDD:254352
I-set 4660..4745 CDD:254352
FN3 4749..4834 CDD:238020
I-set 4862..4923 CDD:254352
I-set 5127..5217 CDD:254352
Ig 5144..5213 CDD:143165
I-set 5357..5447 CDD:254352
Ig 5375..5444 CDD:143165
I-set 5489..5579 CDD:254352
Ig 5513..5579 CDD:299845
Ig 5599..5695 CDD:299845
I-set 5600..5695 CDD:254352
SH3_Obscurin_like 5831..5893 CDD:212958
RhoGEF 5926..6102 CDD:295373
PH_Obscurin 6111..6235 CDD:270059
I-set 6243..6335 CDD:254352
Ig 8..90 CDD:299845
I-set 9..98 CDD:254352
I-set 109..200 CDD:254352
Ig 126..190 CDD:143165
IG 246..326 CDD:214652
Ig 250..319 CDD:299845
I-set 333..416 CDD:254352
I-set 423..499 CDD:254352
FN3 513..600 CDD:238020
I-set 615..>671 CDD:254352
IGc2 <732..781 CDD:197706
IGc2 878..941 CDD:197706
IGc2 970..1033 CDD:197706
IGc2 1062..1125 CDD:197706
IGc2 1154..1217 CDD:197706
IGc2 1246..1309 CDD:197706
IGc2 1338..1401 CDD:197706
IGc2 1430..1493 CDD:197706
IGc2 1522..1585 CDD:197706
IGc2 1614..1677 CDD:197706
IGc2 1706..1769 CDD:197706
IGc2 1798..1861 CDD:197706
IGc2 1891..1950 CDD:197706
I-set 1967..2050 CDD:254352
Ig 1983..2051 CDD:143165
I-set 2057..2140 CDD:254352
IGc2 2069..2132 CDD:197706
I-set 2147..2229 CDD:254352
I-set 2324..2406 CDD:254352
Ig 2331..2395 CDD:299845
I-set 2449..2530 CDD:254352
Ig 2464..2531 CDD:143165
I-set 2626..2709 CDD:254352
Ig 2642..2710 CDD:143165
I-set 2716..2798 CDD:254352
I-set 2804..2887 CDD:254352
Ig 2820..2888 CDD:143165
I-set 2894..>2962 CDD:254352
I-set 2985..3065 CDD:254352
Ig_2 2989..3060 CDD:290606
I-set 3073..3156 CDD:254352
IG 3168..3247 CDD:214652
I-set 3254..3336 CDD:254352
Ig_2 3258..3337 CDD:290606
I-set 3342..3425 CDD:254352
ig 3346..3412 CDD:278476
I-set 3431..3513 CDD:254352
IGc2 3443..3501 CDD:197706
I-set 3519..3601 CDD:254352
IGc2 3531..3589 CDD:197706
I-set 3612..3689 CDD:254352 13/81 (16%)
IGc2 3619..3677 CDD:197706 12/69 (17%)
I-set 3695..>3763 CDD:254352 11/67 (16%)
I-set 3768..3850 CDD:254352 17/89 (19%)
IGc2 3780..3838 CDD:197706 15/65 (23%)
Ig 6260..6327 CDD:143165
IG_like 6349..6427 CDD:214653
IGc2 6350..6418 CDD:197706
I-set 6452..6541 CDD:254352
Ig 6475..6538 CDD:143165
PKc_like 6559..6815 CDD:304357
S_TKc 6562..6815 CDD:214567
IGc2 7540..7606 CDD:197706
FN3 7620..7698 CDD:214495
PKc_like 7732..7988 CDD:304357
S_TKc 7741..7984 CDD:214567
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4475
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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