DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otk and HERK2

DIOPT Version :9

Sequence 1:NP_523705.2 Gene:otk / 36283 FlyBaseID:FBgn0004839 Length:1033 Species:Drosophila melanogaster
Sequence 2:NP_174345.1 Gene:HERK2 / 839937 AraportID:AT1G30570 Length:849 Species:Arabidopsis thaliana


Alignment Length:821 Identity:162/821 - (19%)
Similarity:290/821 - (35%) Gaps:237/821 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 IPGHSFDSGKDALLREDARLVLH-KQNGTLSFASIIASDAGQYQCQLQLEAHAPINSSPGILEVI 374
            |..|:.:....::..:..||:|. ...|.::..::|....|.......|.....:.:.||.|   
plant   116 IENHNVNESSFSVFADGLRLMLDINIAGEIAHKNLILESTGHNATASSLVKEFLLPTGPGKL--- 177

  Fly   375 EQLKFVPQPTS----KNLELDAVVAKVH----CKAQGTPTPQVQWVRDGENTTLPDHVEVDANGT 431
             .|.|:|:..|    ..:|:.:|..|:.    .|..|:                  .||:...| 
plant   178 -VLSFIPEKGSFGFVNAIEIVSVDDKLFKESVTKVGGS------------------EVELGLGG- 222

  Fly   432 LIFRNVNSEHRGN--------------YTCLATNSQGQI--NATVAINVVVTPKFSV---PPVGP 477
               |.:.:.:|.|              |....|:....:  ||.|.:.......:::   .||.|
plant   223 ---RGIETMYRLNVGGPKLGPSKDLKLYRTWETDLSYMVIENAGVEVKNSSNITYALADDSPVAP 284

  Fly   478 IETSEQGTVVMHCQAIGDPKPTIQW----DKDLKYL-----SENNTDRER---FRFLENGTLEIR 530
            :...|...::.:.:.: :.:..|.|    |.:..||     .|...|::.   ||...|......
plant   285 LLVYETARMMSNTEVL-EKRFNISWKFEVDPNFDYLVRLHFCELLVDKQNQRIFRIYINNQTAAG 348

  Fly   531 NVQVEDEGSYGCTIGNSAGL---------KREDVQLV-------VKTTGDG-------FAPEESG 572
            |..:     :....|.:.|:         .:.||..:       |..:||.       |...::|
plant   349 NFDI-----FAHAGGKNKGIYQDYLDPVSSKNDVLWIQLGPDSSVGASGDALLSGLEIFKLSKNG 408

  Fly   573 GDGFLV-------------TRAVLITMTVALAYIVLVV--GLMLWCRYRRQARKARLNDLSTKEA 622
            ....|:             .|.:.|::...:|.|:..|  |:::.|..:::..|   :|.|....
plant   409 NLAHLIRFDSTGHSVSDSKMRIIWISVGAGIAIIIFFVFLGILVVCLCKKRRSK---SDESKNNP 470

  Fly   623 GGDQPDVAGNGKGSEQEPCLSKQHNGHSKSRSKSSGDAQKSDDTACSQQSRASKKSAHIYEQLAL 687
            .|.:|...               |..:|.:.:|::|.:.:.:..|.|...|     .....::..
plant   471 PGWRPLFL---------------HVNNSTANAKATGGSLRLNTLAASTMGR-----KFTLAEIRA 515

  Fly   688 PRSGLSELIQIGRGEFGDVFVGKLKATLVTSPSDKDADTEKQHSNSENGSGGSGSGSTTLSTLNE 752
            ......:.:.||.|.||.|:.|:|                      |:|         ||..:  
plant   516 ATKNFDDGLAIGVGGFGKVYRGEL----------------------EDG---------TLIAI-- 547

  Fly   753 KRRSKTSMDDIEEIKEEEQDQHNQSGLEQLVLVKALNKVKDEQACQEFRRQLDLLRAISHKGVVR 817
            ||.:                .|:|.||                  .||..::.:|..:.|:.:|.
plant   548 KRAT----------------PHSQQGL------------------AEFETEIVMLSRLRHRHLVS 578

  Fly   818 LFGLCREKDPHYMVLEYTDWGDLKQFLLATAGKVNTATAGSSSPPPLTTSQVLAVAYQIARGMDA 882
            |.|.|.|.:...:|.||...|.|:..|.            .|:.|||:..|.|......|||:..
plant   579 LIGFCDEHNEMILVYEYMANGTLRSHLF------------GSNLPPLSWKQRLEACIGSARGLHY 631

  Fly   883 IYRAR---FTHRDLATRNCVISSEFIVKVSYPALCKDKYSREYHKHRNTLL--PIRWLAPECIQE 942
            ::...   ..|||:.|.|.::...|:.|:|...|.|...|.: |.|.:|.:  ...:|.||..:.
plant   632 LHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMD-HTHVSTAVKGSFGYLDPEYFRR 695

  Fly   943 DEYTTKSDIFAYGVVVWE------LFNQATKLPHEELT-NEQVVQRSQAGSLEWSVAEA------ 994
            .:.|.|||::::|||::|      :.|..  ||.:::. .|..:...:..:|| |:.::      
plant   696 QQLTEKSDVYSFGVVLFEAVCARAVINPT--LPKDQINLAEWALSWQKQRNLE-SIIDSNLRGNY 757

  Fly   995 TPDSLR---EILLSCWVSNPKERPSFSQLGAALSKAMQSAE 1032
            :|:||.   ||...|.....|.||...::..:|...:|..|
plant   758 SPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLEYVLQIHE 798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otkNP_523705.2 I-set 26..115 CDD:254352
Ig 31..115 CDD:299845
IGc2 133..195 CDD:197706
Ig 268..373 CDD:299845 12/62 (19%)
Ig 395..460 CDD:143165 13/84 (15%)
I-set 468..559 CDD:254352 19/121 (16%)
IGc2 484..549 CDD:197706 12/76 (16%)
PTK_CCK4 686..1026 CDD:133178 84/360 (23%)
STYKc 692..1020 CDD:214568 83/348 (24%)
HERK2NP_174345.1 Malectin_like 35..403 CDD:372329 54/318 (17%)
STKc_IRAK 526..791 CDD:270968 83/347 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 98 1.000 Inparanoid score I2197
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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