DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otk and RKF1

DIOPT Version :9

Sequence 1:NP_523705.2 Gene:otk / 36283 FlyBaseID:FBgn0004839 Length:1033 Species:Drosophila melanogaster
Sequence 2:NP_174268.7 Gene:RKF1 / 839853 AraportID:AT1G29750 Length:1021 Species:Arabidopsis thaliana


Alignment Length:911 Identity:174/911 - (19%)
Similarity:284/911 - (31%) Gaps:309/911 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 LPDELKNQRIQLRWRKDGKLLRQVELGGSAPIPGHSFDSGKDALLREDARLVLHKQNGT------ 338
            :|.||.| .:.|:    ..||...:|.|:.|           |.|   |||    ||.|      
plant   185 IPQELGN-LVHLK----KLLLSSNKLTGTLP-----------ASL---ARL----QNMTDFRIND 226

  Fly   339 LSFASIIASDAGQYQCQLQLEAHAPINSS-----PGILEVIEQL----------KFVPQPTSKNL 388
            |..:..|.|....::   |||....|.|.     |.::.|:..|          ...|.|:.||:
plant   227 LQLSGTIPSYIQNWK---QLERLEMIASGLTGPIPSVISVLSNLVNLRISDIRGPVQPFPSLKNV 288

  Fly   389 E-LDAVVAKVHCKAQG-TPT-------------------------PQVQWVR-----------DG 415
            . |..::.| :|...| .||                         .|.:.:|           |.
plant   289 TGLTKIILK-NCNISGQIPTYLSHLKELETLDLSFNKLVGGIPSFAQAENLRFIILAGNMLEGDA 352

  Fly   416 ENTTLPDHVEVDANGTLIFRNVNSEHRGNYTCLATNSQGQINATVAINVVVTPKFSVPPVGPIET 480
            .:..|.|.:.||    |.:.|:..:...:..| ..|....:|...:.:...:.|| :|.:...:.
plant   353 PDELLRDGITVD----LSYNNLKWQSPESRAC-RPNMNLNLNLFQSTSTKKSSKF-LPCIKDFKC 411

  Fly   481 SEQGTVVMHCQAIGDP---------------------------KPTIQW--DKDLKYLSENNTDR 516
            ....: .:|....|..                           ||...|  .....::.:||...
plant   412 PRYSS-CLHVNCGGSDMYVKEKKTKELYEGDGNVEGGAAKYFLKPDANWGFSSTGDFMDDNNFQN 475

  Fly   517 ERFRF---------------------------LENG----TLEIRNVQVEDEGSYGCTIGNSAGL 550
            .||..                           ||||    .|:...::..::.:|     |..|.
plant   476 TRFTMFVPASNQSDLYKSARIAPVSLTYFHACLENGNYTINLDFAEIRFTNDENY-----NRLGR 535

  Fly   551 KREDVQLVVKTTGDGF-APEESGGDGFLVTRAVLITMTVALAYIVLVVGLMLWCRYRRQARKARL 614
            :..|:.:..|.....| ..:|:.|    ....::..:|..:....|.:.|. |      |.|...
plant   536 RLFDIYIQEKLVAKDFNIMDEAKG----AQTPIIKPLTAYVTNHFLTIRLS-W------AGKGTT 589

  Fly   615 NDLSTKEAGGDQPDVAGNGKGSEQEPCLSKQHNGHSKSRSKSSGDAQKSDDTA------------ 667
            . :.|:...|  |.::.....|:.:|| .:...|.|.....:.|..      |            
plant   590 R-IPTRGVYG--PIISAISIVSDSKPC-ERPKTGMSPGAYIAIGIG------APCLIIFILGFLW 644

  Fly   668 -CSQQSRASKKSAHIYEQLALPRSGLSELIQ-------------IGRGEFGDVFVGKLKATLVTS 718
             |....|..::....||: .|| ||...|.|             ||.|.||.||.|.|       
plant   645 ICGCLPRCGRQRKDPYEE-ELP-SGTFTLRQIKFATDDFNPTNKIGEGGFGAVFKGVL------- 700

  Fly   719 PSDKDADTEKQHSNSENGSGGSGSGSTTLSTLNEKRRSKTSMDDIEEIKEEEQDQHNQSGLEQLV 783
                 ||                                                      .::|
plant   701 -----AD------------------------------------------------------GRVV 706

  Fly   784 LVKALNKVKDEQACQEFRRQLDLLRAISHKGVVRLFGLCREKDPHYMVLEYTDWGDLKQFLLATA 848
            .||.|:. |..|..:||..::..:..:.|..:|:|.|.|.|:....:..||.:...|...|.:..
plant   707 AVKQLSS-KSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPK 770

  Fly   849 GKVNTATAGSSSPPPLTTSQVLAVAYQIARGMDAIYR---ARFTHRDLATRNCVISSEFIVKVSY 910
            .|          ..|:.......:...||:|:..::.   .:|.|||:...|.::..:...|:|.
plant   771 HK----------QIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLTPKISD 825

  Fly   911 PALCKDKYSREYHKHRNTLLPIRWLAPECIQEDEYTTKSDIFAYGVVVWELFNQATKLPHE---- 971
            ..|.:.....:.|........|.::|||.......|.|:|::::||:|.|:....|.....    
plant   826 FGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNFMGAGD 890

  Fly   972 -----ELTNE--------QVVQRSQAGSLEWSVAEATPDSLREILLSCWVSNPKERPSFSQLGAA 1023
                 |..||        |||.......::...|||    :.::.|.|..::|.:||..|::.|.
plant   891 SVCLLEFANECVESGHLMQVVDERLRPEVDRKEAEA----VIKVALVCSSASPTDRPLMSEVVAM 951

  Fly  1024 L 1024
            |
plant   952 L 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otkNP_523705.2 I-set 26..115 CDD:254352
Ig 31..115 CDD:299845
IGc2 133..195 CDD:197706
Ig 268..373 CDD:299845 27/103 (26%)
Ig 395..460 CDD:143165 17/101 (17%)
I-set 468..559 CDD:254352 21/150 (14%)
IGc2 484..549 CDD:197706 16/124 (13%)
PTK_CCK4 686..1026 CDD:133178 78/372 (21%)
STYKc 692..1020 CDD:214568 72/360 (20%)
RKF1NP_174268.7 LRR 112..395 CDD:227223 51/241 (21%)
leucine-rich repeat 125..147 CDD:275380
leucine-rich repeat 148..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380 4/9 (44%)
leucine-rich repeat 195..218 CDD:275380 11/44 (25%)
leucine-rich repeat 219..242 CDD:275380 4/25 (16%)
leucine-rich repeat 243..266 CDD:275380 6/22 (27%)
leucine-rich repeat 267..287 CDD:275380 3/19 (16%)
leucine-rich repeat 291..314 CDD:275380 6/23 (26%)
leucine-rich repeat 315..337 CDD:275380 1/21 (5%)
leucine-rich repeat 338..356 CDD:275380 2/17 (12%)
Malectin 417..604 CDD:288557 31/205 (15%)
STYKc 686..952 CDD:214568 71/346 (21%)
STKc_IRAK 687..955 CDD:270968 72/347 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 98 1.000 Inparanoid score I2197
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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