DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otk and spegb

DIOPT Version :9

Sequence 1:NP_523705.2 Gene:otk / 36283 FlyBaseID:FBgn0004839 Length:1033 Species:Drosophila melanogaster
Sequence 2:XP_021334681.1 Gene:spegb / 563174 ZFINID:ZDB-GENE-081104-517 Length:3608 Species:Danio rerio


Alignment Length:655 Identity:156/655 - (23%)
Similarity:239/655 - (36%) Gaps:183/655 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 VVENESVKFEC-----ESTDSYSELHYDWLHNGH---------RIAYD-KRVHQIGSNLHIEAVR 85
            |...|:..|||     :.||      .|||.:|.         ::.:| ||...:.:::|     
Zfish  1038 VKAGETALFECHVIGPQDTD------VDWLSDGKLIQPALLNCKMHFDGKRCRLLLNSVH----- 1091

  Fly    86 RTEDVGNYVCIATNLASGAREASPPAKLSVIYLESASVQLLGSNRNELL---------LKCHVEG 141
             .:|.|.|.|   .|::...|.:..|||.||    ||::.|.:.:.::|         ..|.|.|
Zfish  1092 -EDDSGTYTC---KLSTAKEELTSSAKLKV
I----ASIEPLFTRKLDVLEVIEGRNARFDCKVSG 1148

  Fly   142 ASGDLEPLEIEWYRNSEKLSTWKNVQL----DQHRLIIRQPGSEDDGLYRCTASNAAGR-VMSKQ 201
            .    .|.::.|......|...:::::    .:|.|||....:||:|||...|.|:.|. ..:.:
Zfish  1149 T----PPPQVIWSHFDRPLEENEDIRILKEGGRHSLIISHVSNEDEGLYTVAARNSHGEDECAAE 1209

  Fly   202 GYVYQ---------SSVKCLPRLPRRKN--EKMMESWDKQTF--------LCRGK----RGGAAG 243
            .||.:         :.::.:|.:|....  |..:|.:....|        :..|:    |...||
Zfish  1210 LYVQEPRPAISSQIAKLEKMPSIPEEPEVPENEIERFTMPDFVKPLYDMDVVEGREAVLRCKVAG 1274

  Fly   244 LEALPA-----------APEDLRIVQ----------------GPIGQSII--KEGEPTALTCLYE 279
            | ..|.           :.||.::.|                |.:.:.:|  |.|:.|..:.||.
Zfish  1275 L-PYPTITWFHNGKRIDSTEDRKMTQFRDVHSLVVRCVCHAHGGVYKCVISNKVGKATCYSHLYV 1338

  Fly   280 ---LPD---------ELKNQRIQLRWRKDGKL------------LRQVELGGSAPIPGHSFDSGK 320
               |||         .:..:.|.|.|:|..:|            ::|..||.   |......|  
Zfish  1339 TDILPDPPDGAPVVESITGKTITLSWKKPKRLDPSIDPSSLMYAIQQQALGS---IQWTIIAS-- 1398

  Fly   321 DALLREDARLVLHKQNG------TLSFASIIASDAGQYQCQLQLEAHAP-------INSSPGILE 372
              .|::....:.:...|      .||..|...|........:||....|       |...|.|:.
Zfish  1399 --CLKQTTYTISNLSKGVRYAFRVLSITSKAFSKPSPATEPMQLLDRGPYVQEAPVIIDKPDIVY 1461

  Fly   373 VIEQLKFVPQPTSKNLELDAVVAKVHCKAQGTPTPQVQWVRDG-ENTTLPDHVEVDANGTLIFRN 436
            ::|:     ||.|..:.|:.|.|.|..|..|.....    |.| ...::||    |...||....
Zfish  1462 MVEK-----QPLSITVTLNHVNASVTWKRGGVTLSN----RPGLFELSMPD----DDQHTLKLCK 1513

  Fly   437 VNSEHRGNYTCLATNSQGQINATVAINVVVTPKFSV------PPVGPIETSEQGTVVMHCQAIGD 495
            |.|...|..||:|.|..|..:..:.:.:.|.|.|..      ..||  ||.....||.     |.
Zfish  1514 VKSSDVGQLTCIANNKYGSDSCVLTLEMAVAPTFETIMEDLDVNVG--ETPRFAVVVE-----GK 1571

  Fly   496 PKPTIQWDKDLKYLSENNTDRERFRFLENG---TLEIRNVQVEDEGSYGCTIGNSAGLKREDVQL 557
            |.|.|.|.|....|||::    .|.|:.:.   :|.:.|.|.:|.|.|.||..|.||......:|
Zfish  1572 PVPDILWYKGDTLLSESS----HFTFVYDDNECSLVVLNTQADDSGVYTCTAKNLAGSVSCKAEL 1632

  Fly   558 VVKTT 562
            .|.||
Zfish  1633 TVHTT 1637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otkNP_523705.2 I-set 26..115 CDD:254352 24/93 (26%)
Ig 31..115 CDD:299845 24/93 (26%)
IGc2 133..195 CDD:197706 18/74 (24%)
Ig 268..373 CDD:299845 29/141 (21%)
Ig 395..460 CDD:143165 19/65 (29%)
I-set 468..559 CDD:254352 31/99 (31%)
IGc2 484..549 CDD:197706 22/67 (33%)
PTK_CCK4 686..1026 CDD:133178
STYKc 692..1020 CDD:214568
spegbXP_021334681.1 I-set 55..137 CDD:254352
DUF4045 <228..687 CDD:330572
I-set 781..870 CDD:254352
I-set 928..1018 CDD:254352
I-set 1029..1117 CDD:254352 24/93 (26%)
I-set 1123..1212 CDD:254352 20/92 (22%)
I-set 1249..1338 CDD:254352 16/89 (18%)
FN3 1343..1436 CDD:238020 18/99 (18%)
Ig <1479..1541 CDD:325142 19/69 (28%)
I-set 1545..1634 CDD:254352 31/99 (31%)
PKc_like 1659..1913 CDD:328722
I-set 2861..2949 CDD:254352
FN3 2955..3044 CDD:238020
PKc_like 3296..3552 CDD:328722
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4475
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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