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Protein Alignment otk and Unc-89

DIOPT Version :9

Sequence 1:	NP_523705.2	Gene:	otk / 36283	FlyBaseID:	FBgn0004839	Length:	1033	Species:	Drosophila melanogaster
Sequence 2:	NP_001097440.1	Gene:	Unc-89 / 3346201	FlyBaseID:	FBgn0053519	Length:	4218	Species:	Drosophila melanogaster

Alignment Length:	599	Identity:	136/599 - (22%)
Similarity:	225/599 - (37%)	Gaps:	175/599 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly    19 SVLASSSRFQRVPQSQSVVENESVKFECESTDSYSELH------YDWLHNGHRIAYD-------- 69
            :||.....|...|:|||:.:...|     ||...  :|      .:|..:...|.|:
  Fly  2107 AVLVEKPTFIVQPESQSIHDYRPV-----STKVL--VHGVPLPTIEWFKDDKPINYEAINKPGKD 2164

  Fly    70 ---------KRVHQIGSNLHIEAVRRTEDVGNYVCIATNLASGAREASPPAKLSVIYLESASVQL 125
                     |...||.|.|.|::.|. .|||.|.|:||| ..|..:|  |.||:::.|..:.|:.
  Fly  2165 KLYAKEDTKKGTDQIESVLDIKSFRE-NDVGAYTCVATN-EIGVTKA--PFKLAMLSLAPSFVKK 2225

  Fly   126 LGS-----NRNELLLKCHVEGASGDLEPL-EIEWYRNSEKLSTWKNVQLDQH-----RLIIRQPG 179
            |.:     ....|:|:|.|:|:     || .::|.::.:::...:::::..:     :|.|....
  Fly  2226 LDNALDVLQGEPLVLECCVDGS-----PLPTVQWLKDGDEVKPSESIKISTNPDGLVKLEINSCQ 2285

  Fly   180 SEDDGLYRCTASNAAGRVMSKQGYVYQSSVKCLPRLPRRKNEKMMESWDKQTFLCRGKRGGAAGL 244
            ..|.|.|:...||..|                         ||:.        ||
  Fly  2286 PNDSGAYKLIISNPHG-------------------------EKVA--------LC---------- 2307

  Fly   245 EALPAAPEDL--RIVQGPIGQSIIKEGEPTALTCL---YELPDELKNQRIQLRWRKDGKLLRQVE 304
             |:...||::  :.:: ||....:..|||..|...   :..|        :::|.|||.|||
  Fly  2308 -AVAVKPEEMQPKFLK-PITSQTVVVGEPLKLEAQVTGFPAP--------EVKWYKDGMLLR--- 2359

  Fly   305 LGGSAPIPGHSFDSGKDALLREDARLVLHKQNGTLSFASIIAS--DAGQYQCQLQLEAHAPINSS 367
                 |.|..:|               ::..||.:......|.  |||.|:|.        |.:.
  Fly  2360 -----PSPEINF---------------INSPNGQIGLIIDAAQPLDAGVYKCL--------IANK 2396

  Fly   368 PGILEVIEQLKFVPQPTSKNL---------ELDAVVAKVHCKAQGTPTPQVQWVRDGENTTLPD- 422
            .|.:|.:.:::.||: .||.:         .::....|:..|..|.|.|::||..:|.... ||
  Fly  2397 GGEIEGVSKVEIVPK-ESKPVFVAELQDASSIEGFPVKMDIKVVGNPKPKLQWFHNGHEIK-PDA 2459

  Fly   423 -HVEV----DANGTLIFRNVNSEHRGNYTCLATNSQGQINATVAINVV---------VTPKFSVP 473
             |:.:    |.:.:||.........|.|..:|.|.:|...:...:.|.         ..|:| |.
  Fly  2460 SHIAIVENPDNSSSLIIEKTAPGDSGLYEVIAQNPEGSTASKAKLYVAPKADETATEEAPQF-VS 2523

  Fly   474 PVGPIETSEQGTVVMHCQAIGDPKPTIQWDKDLKYLSENNTDRERFRFLENGT---LEIRNVQVE 535
            .:..:...|...:|:....|.:|.|.:.|.||...|:.|    ||.....:|.   |.|:..:..
  Fly  2524 ALRDVNADEGQELVLSAPFISNPMPEVIWSKDGVTLTPN----ERLLMTCDGKHIGLTIKPAEAA 2584

  Fly   536 DEGSYGCTIGNSAG 549
            |.|:|.|.:.|..|
  Fly  2585 DSGNYTCLLANPLG 2598

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.