DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otk and Il1r1

DIOPT Version :9

Sequence 1:NP_523705.2 Gene:otk / 36283 FlyBaseID:FBgn0004839 Length:1033 Species:Drosophila melanogaster
Sequence 2:NP_037255.3 Gene:Il1r1 / 25663 RGDID:2892 Length:590 Species:Rattus norvegicus


Alignment Length:373 Identity:85/373 - (22%)
Similarity:137/373 - (36%) Gaps:71/373 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 GGSAPIPGHSFDSGKDALLREDARLVLHKQNGTLSFASIIASDAGQYQCQLQLEAH--------A 362
            ||:  |..:..||.......:|:|  :|:||..|.|......|:|.|.|.::...:        :
  Rat    69 GGT--IIWYKNDSKTPISADKDSR--IHQQNEHLWFVPAKMEDSGYYYCIMRNSTYCLKTKITMS 129

  Fly   363 PINSSPGI-----LEVIEQLKFVPQPTSKNLELDAVVAKVHCKAQGTPTPQVQWVRDGENTTLPD 422
            .:.:.||:     ...|::|......:.....||      ..|.:....|:|||.::.:...|.|
  Rat   130 V
LENDPGLCYNTQASFIQRLHVAGDGSLVCPYLD------FFKDENNELPKVQWYKNCKPLPLDD 188

  Fly   423 HVEVDANGTLIFRNVNSEHRGNYTCLATNS-QGQINATVAINVVVT--------PKFSVPPVGPI 478
            .........|:..||..||||||||..:.: ||:......:...:|        |....|....:
  Rat   189 GNFFGFKNKLMVMNVAEEHRGNYTCRTSYTYQGKQYPVTRVITFITID
DSKRDRPVIMSPRNETM 253

  Fly   479 ETSEQGTVVMHCQAIGD---------PKPTIQWDKDLKYLSENNTDRERFRFLENGTLE-----I 529
            |.....|:.:.|...|.         ....|:||..:  |:|:      ::|||:.:.:     |
  Rat   254 EADPGSTIQLICNVTGQFTDLVYWKWNGSEIEWDDPI--LAED------YQFLEHPSAKRKYTLI 310

  Fly   530 RNVQVEDEGS------YGCTIGNSAGLKREDVQLVVKTTGDGFAPEESGGDGFLVTRAVLITMTV 588
            ..:.|.:..|      :.|.:.|:..|:...|:||...  ..|.....||.......||.    .
  Rat   311 TTLNVSEVKSQFYRYPFICFVKNTHILETAHVRLVYPV--PDFKNYLIGGFAIFTATAVF----C 369

  Fly   589 ALAYIVLVVGLMLWCRYRRQAR---KARLNDLSTKEAGGDQPDVAGNG 633
            |..|.|..|.::||  ||....   ..:.:|..|.:|....|...|.|
  Rat   370 ACIYKVFKVDIVLW--YRDSCSDFLPPKASDGKTYDAYVLYPKTYGEG 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otkNP_523705.2 I-set 26..115 CDD:254352
Ig 31..115 CDD:299845
IGc2 133..195 CDD:197706
Ig 268..373 CDD:299845 18/79 (23%)
Ig 395..460 CDD:143165 20/65 (31%)
I-set 468..559 CDD:254352 22/110 (20%)
IGc2 484..549 CDD:197706 16/84 (19%)
PTK_CCK4 686..1026 CDD:133178
STYKc 692..1020 CDD:214568
Il1r1NP_037255.3 Ig 47..130 CDD:299845 16/64 (25%)
Ig2_IL1R_like 144..236 CDD:143234 25/97 (26%)
Ig_3 242..333 CDD:290638 18/98 (18%)
IG_like 251..344 CDD:214653 19/100 (19%)
TIR 401..556 CDD:214587 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.