DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otk and him-4

DIOPT Version :9

Sequence 1:NP_523705.2 Gene:otk / 36283 FlyBaseID:FBgn0004839 Length:1033 Species:Drosophila melanogaster
Sequence 2:NP_001024582.1 Gene:him-4 / 181187 WormBaseID:WBGene00001863 Length:5198 Species:Caenorhabditis elegans


Alignment Length:888 Identity:205/888 - (23%)
Similarity:295/888 - (33%) Gaps:286/888 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VLASSSRFQRVPQSQSVVENESVKFECESTDSYSELHYDWLHNG-HRIAYDKRVHQIGSNLHIEA 83
            :||:..:.:.:.....|...:.|.|||::..........|..|| ..|..|..:......|||..
 Worm   697 MLATPPKVEIIQNKMMVGRGDRVSFECKTIRGKPHPKIRWFKNGKDLIKPDDYIKINEGQLHIMG 761

  Fly    84 VRRTEDVGNYVCIATNLASGAREASPPAKLSV----IYLESASVQLLGSNRNELLLKCHVEGASG 144
            . :.||.|.|.|:..|:|....:.   |.|||    ..:||.....:...| ::.|:|...|   
 Worm   762 A-KDEDAGAYSCVGENMAGKDVQV---ANLSVGRVPTIIESPHTVRVNIER-QVTLQCLAVG--- 818

  Fly   145 DLEPLEIEWYRNSEKLSTWKN---VQLDQHRLIIRQPGSEDDGLYRCTASNAAGRVMSKQGYVYQ 206
             :.|.||||.:.:..|:|..|   .||....|:|.....||.|.:.|.|.|..|:         |
 Worm   819 -IPPPEIEWQKGNVLLATLNNPRYTQLADGNLLITDAQIEDQGQFTCIARNTYGQ---------Q 873

  Fly   207 SSVKCLPRLPRRKNEKMMESWDKQTFLCRGKRGGAAGLEALPAAPEDLRIVQGPIGQSIIKEGEP 271
            |                    ...|.:..|......|    ...||:..|           ||:.
 Worm   874 S--------------------QSTTLMVTGLVSPVLG----HVPPEEQLI-----------EGQD 903

  Fly   272 TALTCLYELPDELKNQRIQLRWRKDGKLLRQVELGGSAPIPGHSFDSGKDALLREDARLVLHKQN 336
            ..|:|:.    .|...:..:.|.||.|   .||.|.:..|      .|..:|||      |...|
 Worm   904 LTLSCVV----VLGTPKPSIVWIKDDK---PVEEGPTIKI------EGGGSLLR------LRGGN 949

  Fly   337 GTLSFASIIASDAGQYQCQLQLEAHAPI-NSSPGI-LEVIEQLKFV--PQ------PTSKNLELD 391
                     ..|.|:|.|    .|.:|. ||:..| :::|::.:||  |:      ||...::..
 Worm   950 ---------PKDEGKYTC----IAVSPAGNSTLHINVQLIKKPEFVYKPEGGIVFKPTISGMDEK 1001

  Fly   392 --AVVAKVH-----------CKAQGTPTPQVQWVRDGENTTLPDHVE--VDANGTLIFRNVNSEH 441
              |||...|           |...|||.|.:.|..||...| |:..:  |.|:.|||.|..:..:
 Worm  1002 HVAVVNSTHDVLDGEGFAIPCVVSGTPPPIITWYLDGRPIT-PNSRDFTVTADNTLIVRKADKSY 1065

  Fly   442 RGNYTCLATNSQGQINATVAINVVVTPKFSVPPVGPIETSEQGTV----VMHCQAIGDPKPTIQW 502
            .|.|||.||||.|.......|.::.||..|     |.::|....|    .:.|...|||||.|.|
 Worm  1066 SGVYTCQATNSAGDNEQKTTIRIMNTPMIS-----PGQSSFNMVVDDLFTIPCDVYGDPKPVITW 1125

  Fly   503 DKDLKYLSENNTDRERFRFLENGTLEIRNVQVEDEGSYGCTIGNSAGLKREDVQLVVKTT----- 562
            ..|.|..:|...:       |:|:|.|.||.....|::.|...|:||.....|.|.|.||     
 Worm  1126 LLDDKPFTEGVVN-------EDGSLTIPNVNEAHRGTFTCHAQNAAGNDTRTVTLTVHTTPTINA 1183

  Fly   563 ------------------------------------GDGFAPEESGGDGFLVTRAVLI------- 584
                                                .....|.....||.||.:.|.:       
 Worm  1184 ENQEKIALQNDDIVLECPAKALPPPVRLWTYEGEKIDSQLIPHTIREDGALVLQNVKLENTGVFV 1248

  Fly   585 --------------TMTV-----------ALAYIVLVVGLMLWCR-----------------YRR 607
                          |:||           .:..:|....:.:.||                 .:.
 Worm  1249 CQVSNLAGEDSLSYTLTVHEKPKIISEVPGVVDVVKGFTIEIPCRATGVPEVIRTWNKNGIDLKM 1313

  Fly   608 QARKARLNDLST-------KEAGGDQPDVAGNGKGSE--------QEPCL---SKQHNGHSKSRS 654
            ..:|..:::|.|       |...|:...|..|..|:.        |||.:   |.|.|..:....
 Worm  1314 DEKKFSVDNLGTLRIYEADKNDIGNYNCVVTNEAGTSQMTTHVDVQEPPIILPSTQTNNTAVVGD 1378

  Fly   655 K---------------------------SSGDAQKSDDTACSQQSRASKKSAHIYEQLALPRSGL 692
            :                           :.|...:||.|...|.  ||.:.|.||...|...:|.
 Worm  1379 RVELKCYVEASPPASVTWFRRGIAIGTDTKGYVVESDGTLVIQS--ASVEDATIYTCKASNPAGK 1441

  Fly   693 SELIQIGRGEFGDVFVGKLKATLVTSPSDKDADTEKQHSNSEN 735
            :|              ..|:.|::.||..||.|...|.|..|:
 Worm  1442 AE--------------ANLQVTVIASPDIKDPDVVTQESIKES 1470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otkNP_523705.2 I-set 26..115 CDD:254352 22/89 (25%)
Ig 31..115 CDD:299845 22/84 (26%)
IGc2 133..195 CDD:197706 21/64 (33%)
Ig 268..373 CDD:299845 28/106 (26%)
Ig 395..460 CDD:143165 26/77 (34%)
I-set 468..559 CDD:254352 29/94 (31%)
IGc2 484..549 CDD:197706 21/68 (31%)
PTK_CCK4 686..1026 CDD:133178 13/50 (26%)
STYKc 692..1020 CDD:214568 11/44 (25%)
him-4NP_001024582.1 IG_like 442..515 CDD:214653
IG 527..605 CDD:214652
Ig 628..694 CDD:319273
I-set 702..789 CDD:369462 22/90 (24%)
I-set 793..881 CDD:369462 28/121 (23%)
Ig 899..974 CDD:386229 29/117 (25%)
I-set 1012..1081 CDD:369462 25/69 (36%)
Ig 1109..1172 CDD:319273 22/69 (32%)
Ig 1196..1263 CDD:319273 6/66 (9%)
IG_like 1277..1358 CDD:214653 11/80 (14%)
I-set 1373..1450 CDD:369462 14/92 (15%)
Ig 1474..1544 CDD:386229
IGc2 1563..1628 CDD:197706
Ig 1651..1732 CDD:386229
Ig 1755..1818 CDD:319273
Ig 1839..1912 CDD:386229
Ig 1930..2002 CDD:386229
IG_like 2014..2095 CDD:214653
Ig 2094..2182 CDD:386229
Ig 2190..2283 CDD:386229
I-set 2296..2380 CDD:369462
Ig 2384..2471 CDD:386229
IGc2 2492..2556 CDD:197706
Ig 2580..2654 CDD:386229
Ig 2686..2753 CDD:319273
IG_like 2768..2850 CDD:214653
I-set 2854..2939 CDD:369462
IG_like 2951..3031 CDD:214653
I-set 3046..3116 CDD:369462
I-set 3127..3213 CDD:369462
Ig 3217..3292 CDD:386229
I-set 3300..3386 CDD:369462
I-set 3396..3472 CDD:369462
I-set 3481..3569 CDD:369462
I-set 3591..3663 CDD:369462
Ig 3667..3762 CDD:386229
Ig 3775..3848 CDD:386229
Ig 3859..3947 CDD:386229
IGc2 3968..4031 CDD:197706
Ig_3 4045..4119 CDD:372822
Ig_3 4136..4210 CDD:372822
Ig <4262..4314 CDD:386229
Ig 4318..4406 CDD:386229
IG_like 4418..4496 CDD:214653
I-set 4570..4654 CDD:369462
I-set 4752..4836 CDD:369462
EGF_CA 4996..5027 CDD:238011
EGF_CA 5034..5076 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I7606
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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