DRSC/TRiP Functional Genomics Resources

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Protein Alignment otk and dim-1

DIOPT Version :9

Sequence 1:NP_523705.2 Gene:otk / 36283 FlyBaseID:FBgn0004839 Length:1033 Species:Drosophila melanogaster
Sequence 2:NP_001024420.1 Gene:dim-1 / 181062 WormBaseID:WBGene00001000 Length:640 Species:Caenorhabditis elegans


Alignment Length:602 Identity:121/602 - (20%)
Similarity:195/602 - (32%) Gaps:216/602 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QRVPQSQSVVENESVKFECESTDSYSELHYDWLHNGHRIAYDKRVHQIG----SNLHIEAVRRTE 88
            |:.|||.....|                        ||    ||:. ||    ...|:.......
 Worm   192 QKTPQSTHATSN------------------------HR----KRIF-IGRTGAKQQHVSKKATES 227

  Fly    89 DVGNYVCIATNLASGAREASPPAKLSVIYLESASVQLLGSNRNELLLKCHVEGASGDLEPLEIEW 153
            ::...:.::|:..:.|.||               ::||   :..|||.                 
 Worm   228 ELPYNIDVSTSNTTNATEA---------------LKLL---KRPLLLP----------------- 257

  Fly   154 YRNSEKLSTWKNVQLDQHRLIIRQPGSEDDGLYRCTASNAAGRVMSKQGYVYQSSVKCLPRLPRR 218
             ....:.|....:.|:||:             :||           || |:..|...|       
 Worm   258 -SKDPRSSKMPRLDLNQHQ-------------FRC-----------KQ-YIVHSQFTC------- 289

  Fly   219 KNEKMMESWDKQTFLCR-GKRGGAAGL-----EALP--AAPEDLRIVQGPIGQSIIKEGEPTALT 275
                   :..::||.|| |....:..|     :|:|  .||   ...|.|:.:.  .:.....|.
 Worm   290 -------TQIEKTFKCRVGTSTESEDLDDYYFDAMPDGKAP---HFPQQPVARQ--NDDGSLELE 342

  Fly   276 CLYELPDELKNQRIQLRWRKDGKLLRQVELGG--SAPIPGHSFDSGKDALLREDARLVLHKQNGT 338
            |..:     .|...|::|..|.|   :||..|  ||.:.....||                .:..
 Worm   343 CFVD-----ANPTPQVKWYYDNK---EVENSGRFSANLANKGSDS----------------YSAI 383

  Fly   339 LSFASIIASDAGQYQCQLQLEAHAPIN----------SSPGILEVIEQLKFVPQPTSKNLELDAV 393
            |:...:..:|||.|:|.: :..|...|          |||..:|       .||.:|::   |..
 Worm   384 LTIKELADADAGAYRCAI-VNPHGKGNANFNLKLTGFSSPTFVE-------KPQISSRD---DGQ 437

  Fly   394 VAKVHCKAQGTPTPQVQW---VRDGENTTLPDHVEVDANGTLIFRNV-----------NSEHRGN 444
            |..:..:|:....|...|   |..|....:.:...:.|...|...||           ..:..|.
 Worm   438 VMVMEFRAKSILEPTFVWQKLVGGGAEEIIANSDRIKAVKKLEAGNVYYSALEIKEPTKDKDAGQ 502

  Fly   445 YTCLATNSQGQINATVAINVVVTPKFSVPPVGPIETSEQGTVVMHCQAIGDP------------K 497
            :.|...|..|::.||      .|.||.||...|..| .:..::....|.|:|            .
 Worm   503 FICTVKNESGKLTAT------FTVKFEVPEGAPSFT-RKPQILQQTSAGGEPAICFDIGYSARMN 560

  Fly   498 PTIQW----DKDLKYLSENNTDRERFRFLENGT------LEIRNVQVEDEGSYGCTIGNSAGLKR 552
            |.:.|    .|.:|     .:.|.:|:..:.|.      ||:.|.:.:|.|:|.|.|.|.||...
 Worm   561 PQVTWISPKSKKMK-----ESSRIKFKTNDEGNGNFTAQLELTNYKAKDSGTYTCNIKNDAGEAN 620

  Fly   553 EDVQLVVKTTGDGFAPE 569
            .::.|.::...|.:|.:
 Worm   621 VELTLNIEGPLDDYADD 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otkNP_523705.2 I-set 26..115 CDD:254352 16/90 (18%)
Ig 31..115 CDD:299845 15/87 (17%)
IGc2 133..195 CDD:197706 9/61 (15%)
Ig 268..373 CDD:299845 25/116 (22%)
Ig 395..460 CDD:143165 14/78 (18%)
I-set 468..559 CDD:254352 28/112 (25%)
IGc2 484..549 CDD:197706 19/86 (22%)
PTK_CCK4 686..1026 CDD:133178
STYKc 692..1020 CDD:214568
dim-1NP_001024420.1 I-set 323..415 CDD:254352 25/121 (21%)
IGc2 336..406 CDD:197706 20/94 (21%)
I-set 422..521 CDD:254352 23/114 (20%)
Ig 422..517 CDD:299845 20/104 (19%)
I-set 529..627 CDD:254352 24/103 (23%)
Ig 560..624 CDD:143165 18/68 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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