DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment otk and si:ch73-380l3.4

DIOPT Version :9

Sequence 1:NP_523705.2 Gene:otk / 36283 FlyBaseID:FBgn0004839 Length:1033 Species:Drosophila melanogaster
Sequence 2:XP_017206719.1 Gene:si:ch73-380l3.4 / 101885005 ZFINID:ZDB-GENE-131125-97 Length:517 Species:Danio rerio


Alignment Length:603 Identity:125/603 - (20%)
Similarity:198/603 - (32%) Gaps:203/603 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 SPPAKL-SVIYLE--SASVQLL--GSNRNELLLKCH-----VEGASGDLEPL--EIEWYRNSEKL 160
            :||.|. .|::.:  |:...|:  .||.|.::.|..     ..|:||....|  .:|...:.||:
Zfish    49 NPPTKPDKVVWYQWVSSGYPLVCDPSNSNNVIDKFRGRTSLYGGSSGACSLLIKNLEQSHHGEKI 113

  Fly   161 STWKNVQLDQHRLIIRQPGSEDDGLYRCTASNAAGRVMSKQGYVYQSSVKCLPRLPRRK---NEK 222
            ..|    :|...:     |......|..|::               ..|...|:||...   .||
Zfish   114 YAW----IDPDNI-----GWRTYKFYDVTST---------------IRVDARPQLPSISIFGGEK 154

  Fly   223 MMESWDKQTFLCRGKRGGAAGLEALPAAPEDLRIVQGPIGQSIIKEGEPTALTCLYELPDELKNQ 287
            |   .||.|..|....                                    ||.|.:|      
Zfish   155 M---GDKITVTCSASH------------------------------------TCPYSIP------ 174

  Fly   288 RIQLRWRKDGKLLRQVELGGSAPIPGHSFDSG--KDALLREDARLVLHKQNGTLSFASIIASDAG 350
            ||         :|..:|  ||....|.....|  :.||.|   ..|:..:|.|  |...:..|.|
Zfish   175 RI---------ILNGIE--GSDQTNGDCSSDGQCRIALTR---TAVVKAENTT--FECSVTHDGG 223

  Fly   351 ---------QYQCQLQLEAHAPINSSPGILEVIEQLKFVPQPTSKNLELDAVVAKVHCKAQGTPT 406
                     ..:|     .|..|...|.|:||.|.:|       :|...:...:   |:.:   .
Zfish   224 TTVTATKRQSSEC-----VHQKITVEPEIVEVTEGIK-------QNFTCNVYHS---CQRE---N 270

  Fly   407 PQVQWVRDGENTTLPDHVEVDAN------GTLIFRNVNSEHRGNYTCLATNSQGQINATVAI--- 462
            |.:.|  :.||..:....::.:.      .::.|.....:|.....|.|..|...|.|:||:   
Zfish   271 PTITW--NYENMQVSTGSKIVSGFDRVTYSSISFLGTTEDHGKKLKCTAKVSGRNIEASVALRVQ 333

  Fly   463 ----NVVVTPKFSVPPVGPIETSEQGTVVMHCQAIGDPKPTIQWDKDLKYLSENNTDRERFRFLE 523
                |:.:.|:.:....| :|.:...||...||   ...|||.|:.:...:||.......|..:.
Zfish   334 CVHRNITIEPEIAEITEG-VEQNFTCTVHHSCQ---KENPTITWNYENMQVSEGRQTLSGFDRVV 394

  Fly   524 NGTLEIRNVQVEDEG-SYGCTIGNSAGLKREDVQL--------VVKTTGDGFAPEESGGDGFLVT 579
            ..|:.....: ||.| ...|:...|.|...|.|.|        |:||||                
Zfish   395 YSTITFLGAK-EDHGKKLICSAAFSRGNITESVVLYLQHPILTVLKTTG---------------- 442

  Fly   580 RAVLITMTVALAYIV--LVVGLMLWCRYRRQARKARLNDLSTKEAGGDQPDVAGNGKGSEQEPCL 642
               |..:|.:|.:::  ::.|::: |:.|.:::.|..       ..|.:|               
Zfish   443 ---LYILTPSLVFLLACVIAGVII-CKRRHRSKDASF-------VSGSKP--------------- 481

  Fly   643 SKQHNGHSKSRSKS-SGD 659
            .|.|....||..|| ||:
Zfish   482 FKPHMPSPKSDPKSMSGN 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
otkNP_523705.2 I-set 26..115 CDD:254352 3/7 (43%)
Ig 31..115 CDD:299845 3/7 (43%)
IGc2 133..195 CDD:197706 13/68 (19%)
Ig 268..373 CDD:299845 26/115 (23%)
Ig 395..460 CDD:143165 12/70 (17%)
I-set 468..559 CDD:254352 24/99 (24%)
IGc2 484..549 CDD:197706 17/65 (26%)
PTK_CCK4 686..1026 CDD:133178
STYKc 692..1020 CDD:214568
si:ch73-380l3.4XP_017206719.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4475
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.