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Protein Alignment Hmg20b and Dsp1
DIOPT Version :9
Sequence 1: | XP_006241006.1 |
Gene: | Hmg20b / 362825 |
RGDID: | 1309235 |
Length: | 344 |
Species: | Rattus norvegicus |
Sequence 2: | NP_001138203.1 |
Gene: | Dsp1 / 117294 |
FlyBaseID: | FBgn0278608 |
Length: | 397 |
Species: | Drosophila melanogaster |
Alignment Length: | 190 |
Identity: | 48/190 - (25%) |
Similarity: | 80/190 - (42%) |
Gaps: | 38/190 - (20%) |
- Green bases have known domain annotations that are detailed below.
Rat 30 VKQERSEGPRAGEKGPQEEEARPRPHAPDPAHSSQSPSQGHSPLLQPVKKRGWPK------GKKR 88
|.:|:.......||..|..||..:.:.| || ||||
Fly 227 VDKEKKRFHEMAEKDKQRYEAEMQNYVP-------------------------PKGAVVGRGKKR 266
Rat 89 KKIL-PNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEKE 152
|:|. ||.||..::.:..|.|:.|.:::..:|:....:|.|.||.:||.:.|..||:|...||::
Fly 267 KQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERD 331
Rat 153 KQQYLKELWAYQQSEAYKVCTEKIQENKIKKEDSSSGLMNTLLNGHKGV------DCGDG 206
|.:|.:|:..|:.|....:....:|.:...:...::.|.......|:.: |.|||
Fly 332 KARYEREMTEYKTSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLEEQHDDDDGDG 391
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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