DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8298 and psmc1b

DIOPT Version :10

Sequence 1:NP_610718.1 Gene:CG8298 / 36282 FlyBaseID:FBgn0033673 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_001002091.1 Gene:psmc1b / 415181 ZFINID:ZDB-GENE-040625-69 Length:440 Species:Danio rerio


Alignment Length:79 Identity:15/79 - (18%)
Similarity:26/79 - (32%) Gaps:37/79 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 RHNVDYVRYRSGLPLSSCFSALKIRWLMDHVPAVATAIEENKCLFGTLDSWLLWNLTGGVEMGVH 195
            |..||.:|   |.|:|              |..:...|::|..:.                    
Zfish    96 RSKVDDLR---GTPMS--------------VGTLEEIIDDNHAIV-------------------- 123

  Fly   196 STDITNAHYTSLMN 209
            ||.:.:.||.|:::
Zfish   124 STSVGSEHYVSILS 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8298NP_610718.1 ASKHA_ATPase-like 19..540 CDD:483947 15/79 (19%)
psmc1bNP_001002091.1 PTZ00361 1..440 CDD:185575 15/79 (19%)

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