DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8298 and Atad2

DIOPT Version :10

Sequence 1:NP_610718.1 Gene:CG8298 / 36282 FlyBaseID:FBgn0033673 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_001128351.1 Gene:Atad2 / 314993 RGDID:1304849 Length:1373 Species:Rattus norvegicus


Alignment Length:407 Identity:80/407 - (19%)
Similarity:130/407 - (31%) Gaps:136/407 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 VKAGQNVCTLDDSCFVLLNT--GREKLDSANGLITGIAHKLGEKAATNYTLEGAISNAGSTVTWL 332
            |:.|.|.....|..|.||.:  .....|:.:....|::.|...:|..|........||.......
  Rat   712 VEVGTNKALNSDVSFPLLESDLAYSDDDTPSMYENGLSQKNFNQAKENLNFLHLNRNACYQPMSF 776

  Fly   333 RDKLQINTEINSNDN------VVESLNTF----------IGENSMISSSCSSSMLNAECGLAAKR 381
            |.:|.|..|.....:      |:.:|..|          .|.::.......|.|:.     .|||
  Rat   777 RPRLLIVGEPGFGQSSHLAPAVIHALEKFTVYTLDIPVLFGISTTSPEEACSQMIR-----EAKR 836

  Fly   382 S--EITFVPAFHGMYAPYWRHDARGIILGLTSQTTAENI-----------TQAAYEATGFQIFEV 433
            :  .|.:||..|    .:|  :..|..|..|..|..:||           ::..|.|...::.|:
  Rat   837 TAPSIVYVPHVH----LWW--EIVGPTLRATFTTLLQNIPSFAPVLLLATSERPYSALPEEVQEL 895

  Fly   434 LQAFKRDTPNWDRSSMQPVLTFGGDYAE--NLHL------VQFIADIIGYMLERPQTTSP----A 486
                                 |..||.|  |:.|      .:|..|:|.....:|..:..    .
  Rat   896 ---------------------FTHDYGEIFNVQLPDKEERTKFFEDLILKQAAKPPVSQKKAVLQ 939

  Fly   487 GLGVM----------ITA----------------------GVTMKVVSLEHAVKMYTPPTDVFSP 519
            .|.|:          :||                      .||.: ::::...:::|.|.|   |
  Rat   940 ALEVLPVAPPPEPRPLTAEEVKRLEEQEEDTFRELRIFLRNVTHR-LAIDKRFRVFTKPVD---P 1000

  Fly   520 -------TTTKNRRELLYKRWAYAVKKC-LH-WNNYETYEADIELFAQRELDPNLPVRRSVPGSI 575
                   |..|...:|     :..:.|. || :...:.|..||:|.....|:.| |.|.  ||..
  Rat  1001 DEVPDYVTVIKQPMDL-----SSVISKIDLHKYLTVKDYLKDIDLICSNALEYN-PDRD--PGDR 1057

  Fly   576 FL--------TTSFAMI 584
            .:        .|::|:|
  Rat  1058 LIRHRACALRDTAYAII 1074

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8298NP_610718.1 ASKHA_ATPase-like 19..540 CDD:483947 64/351 (18%)
Atad2NP_001128351.1 RecA-like_Yta7-like 412..581 CDD:410925
AAA_lid_3 609..643 CDD:465537
ycf46 <778..919 CDD:177094 33/172 (19%)
Bromo_AAA 972..1082 CDD:99957 25/115 (22%)
Blue background indicates that the domain is not in the aligned region.

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