DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8298 and Gykl1

DIOPT Version :9

Sequence 1:NP_610718.1 Gene:CG8298 / 36282 FlyBaseID:FBgn0033673 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_599168.1 Gene:Gykl1 / 291468 RGDID:1305596 Length:549 Species:Rattus norvegicus


Alignment Length:590 Identity:210/590 - (35%)
Similarity:330/590 - (55%) Gaps:59/590 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GALIGVACVSSTHCRFLIYSTKNAEVLAYHELKLRQIVHQAGWMEYDPSEIWKNTQECIETAYKN 74
            |.|:|.....::..|||:::.:.||:|.:|::::.|...:.||:|.||..|.::..||||...:.
  Rat    10 GPLVGAVDQGTSSTRFLVFNPQTAELLCHHQVEIAQEFPREGWVEQDPKVILQSVYECIEKTCEK 74

  Fly    75 LVILEINPRDIIAIGIVNQRGTSVLWNLETGQPLHNAIGWSDCRSTPILKTLLHNVRHNVDYVRY 139
            |....|:..:|.|||:.|||.|:::|:..||:||:||:.|.|.|:...::.|..::..:.::::.
  Rat    75 LGQQSIDISNIKAIGVTNQRETTIVWDKFTGEPLYNAVVWLDLRTQSTVENLNKSISASNNFIKI 139

  Fly   140 RSGLPLSSCFSALKIRWLMDHVPAVATAIEENKCLFGTLDSWLLWNLTGGVEMGVHSTDITNAHY 204
            ::|||:|:.|||:|:.||:::|..|..|||:.:..|||:||||:|.:|||:..|||.||::||..
  Rat   140 KTGLPISTYFSAVKLHWLIENVKNVQKAIEDGRAFFGTVDSWLIWCMTGGINGGVHCTDVSNASR 204

  Fly   205 TSLMNVSTEQWDPKLCQFFRLPLNILPRIRSNSEIFGYVLEGPLHGTPIAAMMGEQPASLLGQLC 269
            |.|.|:.:.|||.:||:||.:|:.|||||||:|||:|.:..|.|.|.||:..:|:|.|:|:||||
  Rat   205 TMLFNIHSLQWDEELCEFFGIPMTILPRIRSSSEIYGLMKSGVLEGVPISGCLGDQSAALVGQLC 269

  Fly   270 VKAGQNVCTLDDSCFVLLNTGREKLDSANGLITGIAHKLGEKAATNYTLEGAISNAGSTVTWLRD 334
            ::.||...|....||:|.|||::.::|.:||:|.:|:|:|.:....|.|||:::.||:.|:||::
  Rat   270 LQDGQAKSTYGTGCFLLCNTGQKCVNSDHGLLTTVAYKMGREEPVYYALEGSVAIAGAVVSWLKN 334

  Fly   335 KLQINTEINSNDNVVESLNTFIGENSMISSSCSSSMLNAECGLAAKRSEITFVPAFHGMYAPYWR 399
            .|||   |.|:.::.:     :.|.:..|..|                  .|||||.|:|||||.
  Rat   335 NLQI---IKSSSDIEK-----LAEKAGTSYGC------------------YFVPAFSGLYAPYWD 373

  Fly   400 HDARGIILGLTSQTTAENITQAAYEATGFQIFEVLQAFKRDTPNWDRSSMQPVLTFGGDYAENLH 464
            ..|||||.|||..|...:|..||.||..||..|:|     |..|.|.......|...|....|..
  Rat   374 PSARGIICGLTQFTNKFHIAFAALEAVCFQTREIL-----DAMNSDCGIPLTHLQVDGGMTANKI 433

  Fly   465 LVQFIADIIGYMLERPQTTSPAGLGVMITAGVT--MKVVSLEHAVKMYTPPTDV-------FSPT 520
            |:|..|||:...:.:|.......||..:.||..  ::|.||:        |.|:       |.|.
  Rat   434 LMQLQADILCIPVMKPFMPETTALGAAMAAGAAEGIRVWSLD--------PKDLTGVQMEKFEPQ 490

  Fly   521 TTKNRRELLYKRWAYAVKKCLHWNNYETYEADIELFAQRELDPNLPVRRSVPGSIFLTTSFAMII 585
            ......|..|..|..||.|.:.|...::.:..         ||:  :.||:....::.:|..::|
  Rat   491 INVEESEGRYSTWKRAVMKSMGWVLTQSPDGH---------DPS--IFRSLTLGFYIVSSMVLLI 544

  Fly   586 LANYL 590
            .|.|:
  Rat   545 GARYI 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8298NP_610718.1 FGGY_GK 12..534 CDD:198347 196/530 (37%)
glycerol_kin 21..543 CDD:273549 198/530 (37%)
Gykl1NP_599168.1 glycerol_kin 11..513 CDD:273549 200/540 (37%)
FGGY_GK1-3_metazoa 11..513 CDD:212664 200/540 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337242
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D352321at33208
OrthoFinder 1 1.000 - - FOG0001035
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10196
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.810

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