DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8298 and Psmc2

DIOPT Version :9

Sequence 1:NP_610718.1 Gene:CG8298 / 36282 FlyBaseID:FBgn0033673 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_150239.2 Gene:Psmc2 / 25581 RGDID:3428 Length:433 Species:Rattus norvegicus


Alignment Length:224 Identity:44/224 - (19%)
Similarity:69/224 - (30%) Gaps:100/224 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 TAIEENKCLFGTLDSWL----LWNLTGGVEMGVHSTDITNAHYTSLMNVSTEQWDPK----LCQF 222
            |.|:|:       |:.|    ||:|....:.......:..|..|.::|..:|  |||    :.||
  Rat    63 TGIKES-------DTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSE--DPKYIINVKQF 118

  Fly   223 FR--------------------------------LPLNILPRIR----------SNSEIFG---- 241
            .:                                ||..|.|.:.          :.|::.|    
  Rat   119 AKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQ 183

  Fly   242 -----YVLEGP-LHGTPIAAMMGEQPASLL-------GQ-LCVKAGQNVCTLDDSCFVLLNTGRE 292
                 .|:|.| ||......:..|.|..:|       |: ||.:|   |....|:||:.:     
  Rat   184 IEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARA---VANRTDACFIRV----- 240

  Fly   293 KLDSANGLITGIAHKLGEKAATNYTLEGA 321
                           :|.:....|..|||
  Rat   241 ---------------IGSELVQKYVGEGA 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8298NP_610718.1 FGGY_GK 12..534 CDD:198347 44/224 (20%)
glycerol_kin 21..543 CDD:273549 44/224 (20%)
Psmc2NP_150239.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
RPT1 23..430 CDD:224143 44/224 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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