DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8298 and Psmc2

DIOPT Version :10

Sequence 1:NP_610718.1 Gene:CG8298 / 36282 FlyBaseID:FBgn0033673 Length:596 Species:Drosophila melanogaster
Sequence 2:NP_035318.2 Gene:Psmc2 / 19181 MGIID:109555 Length:433 Species:Mus musculus


Alignment Length:224 Identity:44/224 - (19%)
Similarity:69/224 - (30%) Gaps:100/224 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 TAIEENKCLFGTLDSWL----LWNLTGGVEMGVHSTDITNAHYTSLMNVSTEQWDPK----LCQF 222
            |.|:|:       |:.|    ||:|....:.......:..|..|.::|..:|  |||    :.||
Mouse    63 TGIKES-------DTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSE--DPKYIINVKQF 118

  Fly   223 FR--------------------------------LPLNILPRIR----------SNSEIFG---- 241
            .:                                ||..|.|.:.          :.|::.|    
Mouse   119 AKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQ 183

  Fly   242 -----YVLEGP-LHGTPIAAMMGEQPASLL-------GQ-LCVKAGQNVCTLDDSCFVLLNTGRE 292
                 .|:|.| ||......:..|.|..:|       |: ||.:|   |....|:||:.:     
Mouse   184 IEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARA---VANRTDACFIRV----- 240

  Fly   293 KLDSANGLITGIAHKLGEKAATNYTLEGA 321
                           :|.:....|..|||
Mouse   241 ---------------IGSELVQKYVGEGA 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8298NP_610718.1 ASKHA_ATPase-like 19..540 CDD:483947 44/224 (20%)
Psmc2NP_035318.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
PRK03992 44..430 CDD:179699 44/224 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.